ICEberg
I. Information of IME
ICEberg ID221_IME
Name SGI1-Pm2CHAMA This is a predicted IME derived from literature
Family-
OrganismProteus mirabilis PmSCO
Size (bp)53552 bp
GC content [Genome] (%)
Insertion site3'-end of the trmE
Function-
Species that IME can be transferred to-
Nucleotide SequenceMF372716 (complete IME sequence in this contig)
Replicon-
Coordinates1348..54899
Putative oriT region -
Putative relaxase -


II. IME interaction with ICE/CIME/Plasmids

The interaction information of SGI1-Pm2CHAMA is not available.


The graph information of SGI1-Pm2CHAMA components from MF372716
Complete gene list of SGI1-Pm2CHAMA from MF372716
#GeneCoordinates [+/-], size (bp) Product *Reannotation 
1trmE1..1365 [+], 1365tRNA modification GTPase
2int SGI1569..2786 [+], 1218integrase
3xis2783..3151 [-], 369excisionase
4rep3509..4462 [-], 954replication protein
5-4449..4739 [-], 291hypothetical protein
6traN4827..7586 [-], 2760conjugal transfer mating pair stabilization protein TraNTraN_F, T4SS component 
7-7683..8216 [-], 534putative regulator protein
8-8219..8830 [-], 612hypothetical protein
9-8830..9051 [-], 222hypothetical protein
10-9226..9516 [+], 291hypothetical protein
11-9536..9790 [-], 255hypothetical protein
12traG9790..13194 [-], 3405putative pilus assembly protein TraGTraG_F, T4SS component 
13traH13198..14622 [-], 1425conjugal transfer pilus assembly protein TraHTraH_F, T4SS component 
14-14866..15723 [+], 858hypothetical protein
15-15720..16115 [+], 396hypothetical protein
16-16530..16799 [-], 270hypothetical protein
17-16877..17062 [-], 186hypothetical protein
18-16922..17176 [+], 255hypothetical protein
19-17073..17390 [-], 318hypothetical protein
20-17648..17944 [-], 297hypothetical protein
21-17948..18913 [-], 966putative integrase
22-19006..19341 [+], 336hypothetical protein
23-19253..19528 [-], 276hypothetical protein
24-19889..21529 [-], 1641putative helicase
25-21547..23472 [-], 1926putative exonuclease
26sgiT23550..26093 [-], 2544toxin protein of the Toxin-Antitoxin system sgiAT, subtilisin-like serine protease
27sgiA26114..27103 [-], 990antitoxin protein of the Toxin-Antitoxin system sgiAT, AAA ATPase
28resG27182..27766 [-], 585resolvase
29intI128039..29052 [-], 1014IntI1 integraseIntegrase 
30qacH29303..29635 [+], 333QacH protein
31aadA129709..30500 [+], 792aminoglycoside adenyltransferase AadA1AR 
32qacEdelta130664..31011 [+], 348QacEdelta1
33sul131005..31844 [+], 840Sul1 dihydropteroate synthaseAR 
34-31972..32472 [+], 501GCN5-like N-acetyltransferase, hypothetical protein
35istB32648..33430 [-], 783IstB IS1326TrbB, T4SS component 
36istA33420..34943 [-], 1524IstA IS1326
37-35066..36610 [+], 1545IS1353 transposase
38tniB36661..37521 [-], 861transposase
39tnp2638012..38716 [-], 705Tnp26
40aphA1a38869..39684 [+], 816aminoglycoside phosphotransferaseAR 
41tnp2639874..40578 [-], 705Tnp26
42-41248..41565 [+], 318transposase A
43-42218..43300 [-], 1083putative transposase
44-43297..43695 [-], 399putative transposase
45strA44088..44891 [+], 804streptomycin phosphotransferase AAR 
46strB44891..45727 [+], 837streptomycin phosphotransferase BAR 
47blaCARB-445893..46759 [+], 867CARB-4 beta-lactamaseAR 
48tnp2647824..48528 [-], 705Tnp26
49intI149065..50078 [-], 1014IntI1 integraseIntegrase 
50dfrA1550235..50708 [+], 474DfrA15 dihydrofolate reductaseAR 
51qacEdelta150909..51256 [+], 348QacEdelta1
52sul151250..52089 [+], 840Sul1 dihydropteroate synthaseAR 
53-52217..52717 [+], 501GCN5-like N-acetyltransferase, hypothetical protein
54-52741..53028 [+], 288hypothetical protein
55tnpA610053224..53988 [+], 765IS6100 transposase
56hipB55066..55323 [+], 258transcriptional regulator
57hipA55324..56637 [+], 1314putative regulatory protein
58-57039..57503 [+], 465membrane protein
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer
virulence  Gene may be involved in adaptative function

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins54Fasta
(1) de Curraize C; Neuwirth C; Bador J; Chapuis A; Amoureux L; Siebor E (2018). Two new Salmonella genomic islands 1 from Proteus mirabilis and description of blaCTX-M-15 on a variant (SGI1-K7). J Antimicrob Chemother. . [PudMed:29659873]