I. Information of IME
ICEberg ID218_IME
Name SGI1-O This is a predicted IME derived from literature
OrganismProteus mirabilis PmCAU
Size (bp)33223 bp
GC content [Genome] (%)
Insertion site3'-end of the trmE
FunctiondfrA1, sul1
Species that IME can be transferred to-
Nucleotide SequenceKJ186150 (complete IME sequence in this contig)
Putative oriT region -
Putative relaxase -

II. IME interaction with ICE/CIME/Plasmids

The interaction information of SGI1-O is not available.

The graph information of SGI1-O components from KJ186150
Complete gene list of SGI1-O from KJ186150
#GeneCoordinates [+/-], size (bp) Product *Reannotation 
1thdF1..156 [+], 156tRNA modification GTPase
2int360..1577 [+], 1218integrase
3xis1574..1942 [-], 369excisionase
4-2300..3253 [-], 954replication protein
5-3618..6377 [-], 2760putative mating pair stabilization proteinTraN_F, T4SS component 
6-6474..7007 [-], 534putative regulator protein
7-7010..7621 [-], 612hypothetical protein
8-7621..7842 [-], 222hypothetical protein
9-8017..8307 [+], 291hypothetical protein
10-8327..8581 [-], 255hypothetical protein
11-8581..11985 [-], 3405putative pilus assembly proteinTraG_F, T4SS component 
12-11989..13413 [-], 1425putative pilus assembly proteinTraH_F, T4SS component 
13-13657..14514 [+], 858hypothetical protein
14-14511..14906 [+], 396hypothetical protein
15-15321..15590 [-], 270hypothetical protein
16-15668..15853 [-], 186hypothetical protein
17-15713..15967 [+], 255hypothetical protein
18-15864..16181 [-], 318hypothetical protein
19-16439..16735 [-], 297hypothetical protein
20-16739..17704 [-], 966putative integrase
21-17797..18132 [+], 336hypothetical protein
22-18044..18319 [-], 276hypothetical protein
23-18680..20320 [-], 1641putative helicase
24-20338..22263 [-], 1926putative exonuclease
25-22341..24884 [-], 2544putative subtilisin proteinase-like protein
26-24905..25894 [-], 990putative ATPase
27res25973..26557 [-], 585resolvase
28intI126831..27844 [-], 1014IntI1 integraseIntegrase 
29dfrA128001..28474 [+], 474dihydrofolate reductaseAR 
30-28568..29047 [+], 480OrfC
31qacEdelta129178..29525 [+], 348QacEdelta1
32sul129519..30358 [+], 840Sul1 dihydropteroate synthaseAR 
33-30486..30986 [+], 501acetyltransferase
34-31010..31297 [+], 288hypothetical protein
35-31463..32257 [+], 795IS6100 transposase
36-32605..33234 [+], 630hypothetical protein
37hipB33510..33767 [+], 258transcriptional regulator
38hipA33768..35081 [+], 1314regulatory protein
39-35484..35904 [+], 421membrane protein
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer
virulence  Gene may be involved in adaptative function

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
(1) Soliman AM; Ahmed AM; Shimamoto T; El-Domany RA; Nariya H; Shimamoto T (2017). First report in Africa of two clinical isolates of Proteus mirabilis carrying Salmonella genomic island (SGI1) variants, SGI1-PmABB and SGI1-W. Infect Genet Evol. 51:132-137. [PudMed:28359833]
(2) Lei CW; Zhang AY; Liu BH; Wang HN; Guan ZB; Xu CW; Xia QQ; Cheng H; Zhang DD (2014). Molecular characteristics of Salmonella genomic island 1 in Proteus mirabilis isolates from poultry farms in China. Antimicrob Agents Chemother. 58(12):7570-2. [PudMed:25267683]
(3) Doublet B; Poirel L; Praud K; Nordmann P; Cloeckaert A (2010). European clinical isolate of Proteus mirabilis harbouring the Salmonella genomic island 1 variant SGI1-O. J Antimicrob Chemother. 65(10):2260-2. [PudMed:20682564]
(4) Boyd DA; Shi X; Hu QH; Ng LK; Doublet B; Cloeckaert A; Mulvey MR (2008). Salmonella genomic island 1 (SGI1), variant SGI1-I, and new variant SGI1-O in proteus mirabilis clinical and food isolates from China. Antimicrob Agents Chemother. 52(1):340-4. [PudMed:18025121]