ICEberg
I. Information of IME
ICEberg ID211_IME
Name SGI1-H This is a predicted IME derived from literature
Family-
OrganismSalmonella enterica Agona 953SA98
Size (bp)-
GC content [Genome] (%)
Insertion site3'-end of the trmE
Functionaac(3)-ld, aadA7, sul1, floR, tetA(G), tetR and blapse-1
Species that IME can be transferred to-
Nucleotide SequenceAY458224 (partical IME sequence)
Putative oriT region -
Putative relaxase -


II. IME interaction with ICE/CIME/Plasmids

The interaction information of SGI1-H is not available.


The graph information of SGI1-H components from AY458224
Incomplete gene list of SGI1-H from AY458224
#GeneCoordinates [+/-], size (bp) Product *Reannotation 
1intI11..549 [-], 549integraseIntegrase 
2aac(3)-Id707..1183 [+], 477aminoglycoside acetyltransferase
3aadA71259..2056 [+], 798aminoglycoside adenyltransferase
4qacEdelta12220..2567 [+], 348quaternary ammonium compound and disinfectant protein
5sul1delta2561..3532 [+], 972sul1delta fusion proteinAR 
6floR3749..3813 [+], 65chloramphenicol and florfenicol resistance protein
 
integrase Gene may contribute to site-specific recombination
virulence  Gene may be involved in adaptative function

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins6Fasta
(1) Doublet B; Weill FX; Fabre L; Chaslus-Dancla E; Cloeckaert A (2004). Variant Salmonella genomic island 1 antibiotic resistance gene cluster containing a novel 3'-N-aminoglycoside acetyltransferase gene cassette, aac(3)-Id, in Salmonella enterica serovar newport. Antimicrob Agents Chemother. 48(10):3806-12. [PudMed:15388438]
 

Genomics & Bioinformatics Group in MML, SJTU