I. Information of IME
ICEberg ID206_IME
Name SGI1-B This is a predicted IME derived from literature
OrganismSalmonella enterica DT104 S/960725
Size (bp)33178 bp
GC content [Genome] (%)
Insertion site3'-end of the trmE
Functionpse-1 (ASu) cassette, sul1
Species that IME can be transferred to-
Nucleotide SequenceKU987430 (complete IME sequence in this contig)
Putative oriT region -
Putative relaxase -

II. IME interaction with ICE/CIME/Plasmids

The interaction information of SGI1-B is not available.

The graph information of SGI1-B components from KU987430
Complete gene list of SGI1-B from KU987430
#GeneCoordinates [+/-], size (bp) Product *Reannotation 
1thdF1..163 [+], 163tRNA modification GTPase
2int367..1584 [+], 1218integrase
3xis1581..1949 [-], 369excisionase
4rep2307..3260 [-], 954replication protein
5S0043247..3537 [-], 291hypothetical protein
6-3625..6384 [-], 2760putative mating pair stabilization proteinTraN_F, T4SS component 
7-6481..7014 [-], 534putative regulator protein
8-7017..7628 [-], 612hypothetical protein
9-7628..7849 [-], 222hypothetical protein
10-8024..8314 [+], 291hypothetical protein
11-8334..8588 [-], 255hypothetical protein
12-8588..11992 [-], 3405putative pilus assembly proteinTraG_F, T4SS component 
13-11996..13420 [-], 1425putative pilus assembly proteinTraH_F, T4SS component 
14-13664..14521 [+], 858hypothetical protein
15-14518..14913 [+], 396hypothetical protein
16-15328..15597 [-], 270hypothetical protein
17-15675..15860 [-], 186hypothetical protein
18-15720..15974 [+], 255hypothetical protein
19-15871..16188 [-], 318hypothetical protein
20-16446..16742 [-], 297hypothetical protein
21-16746..17711 [-], 966putative integrase
22-17804..18139 [+], 336hypothetical protein
23-18051..18326 [-], 276hypothetical protein
24-18687..20327 [-], 1641putative helicase
25-20345..22270 [-], 1926putative exonuclease
26-22348..24891 [-], 2544putative subtilisin proteinase-like protein
27-24912..25901 [-], 990putative ATPase
28res25980..26564 [-], 585resolvase
29intI126838..27851 [-], 1014IntI1 integraseIntegrase 
30blaPSE-128057..28923 [+], 867beta-lactamaseAR 
31qacEdelta129140..29487 [+], 348QacEdelta1
32sul129481..30320 [+], 840dihydropteroate synthaseAR 
33-30448..30948 [+], 501acetyltransferase
34-30972..31259 [+], 288hypothetical protein
35-31425..32219 [+], 795IS6100 transposase
36S04432567..33196 [+], 630hypothetical protein
37hipB33472..33729 [+], 258transcriptional regulator
38hipA33730..35043 [+], 1314regulatory protein
39PMI312435446..35500 [+], 55membrane protein
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer
virulence  Gene may be involved in adaptative function

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
(1) Schultz E; Barraud O; Madec JY; Haenni M; Cloeckaert A; Ploy MC; Doublet B (2017). Multidrug Resistance Salmonella Genomic Island 1 in a Morganella morganii subsp. morganii Human Clinical Isolate from France. mSphere. 2(2). [PudMed:28435889]
(2) Boyd D; Cloeckaert A; Chaslus-Dancla E; Mulvey MR (2002). Characterization of variant Salmonella genomic island 1 multidrug resistance regions from serovars Typhimurium DT104 and Agona. Antimicrob Agents Chemother. 46(6):1714-22. [PudMed:12019080]
(3) Boyd D; Peters GA; Cloeckaert A; Boumedine KS; Chaslus-Dancla E; Imberechts H; Mulvey MR (2001). Complete nucleotide sequence of a 43-kilobase genomic island associated with the multidrug resistance region of Salmonella enterica serovar Typhimurium DT104 and its identification in phage type DT120 and serovar Agona. J Bacteriol. 183(19):5725-32. [PudMed:11544236]