ICEberg
I. Information of IME
ICEberg ID205_IME
Name SGI1-A This is a predicted IME derived from literature
Family-
OrganismSalmonella enterica Agona 1169SA97
Size (bp)-
GC content [Genome] (%)
Insertion site3'-end of the trmE
FunctionaadA2, sul1, floR, pse-1
Species that IME can be transferred to-
Nucleotide SequenceAY049746 (partical IME sequence)
Putative oriT region -
Putative relaxase -


II. IME interaction with ICE/CIME/Plasmids

The interaction information of SGI1-A is not available.


The graph information of SGI1-A components from AY049746
Incomplete gene list of SGI1-A from AY049746
#GeneCoordinates [+/-], size (bp) Product *Reannotation 
1qacEdelta63..410 [+], 348quaternary ammonium compound and disinfectant resistance protein
2sulI404..1243 [+], 840dihydropteroate synthaseAR 
3-1648..3189 [+], 1542transposase-like protein
4dhfrX3571..4134 [+], 564dihydrofolate reductase XAR 
5qacEdelta4171..4260 [+], 90quaternary ammonium and disinfectant resistance protein
 
virulence  Gene may be involved in adaptative function

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins5Fasta
(1) Boyd D; Cloeckaert A; Chaslus-Dancla E; Mulvey MR (2002). Characterization of variant Salmonella genomic island 1 multidrug resistance regions from serovars Typhimurium DT104 and Agona. Antimicrob Agents Chemother. 46(6):1714-22. [PudMed:12019080]
(2) Boyd D; Peters GA; Cloeckaert A; Boumedine KS; Chaslus-Dancla E; Imberechts H; Mulvey MR (2001). Complete nucleotide sequence of a 43-kilobase genomic island associated with the multidrug resistance region of Salmonella enterica serovar Typhimurium DT104 and its identification in phage type DT120 and serovar Agona. J Bacteriol. 183(19):5725-32. [PudMed:11544236]
 

Genomics & Bioinformatics Group in MML, SJTU