![]() | 1_IME |
![]() ![]() | ATE-1 ![]() |
![]() | - |
![]() | Trueperella pyogenes |
![]() | 10540 bp |
![]() | |
![]() | 3′ of guaA (GMP synthase) |
![]() | tet(W) (Tetracycline resistance gene) |
![]() | Escherichia coli |
![]() | AY049983 (complete IME sequence in this contig) |
![]() | - |
![]() | 2137..12676 |
![]() ![]() | - |
![]() ![]() | coordinates: 6458..7801; Gene: mob; Family: MOBV |
The Interaction Network among ICE/IME/CIME/plasmid | ||||||
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Detailed Informatioin of the Interaction Network | ||||||
# | IME ![]() | Inter_Ele![]() | Methods | Donors | Recipients | Exper_Ref ![]() |
1 | ATE-1 | RP4 [IncP plasmid] | ![]() | E. coli S17-1 | E. coli DH5αMCR | 11959557 |
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The graph information of ATE-1 components from AY049983 | |||||
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Complete gene list of ATE-1 from AY049983 | |||||
# | Gene | Coordinates [+/-], size (bp) | Product | *Reannotation ![]() | |
1 | rluA | 1..562 [+], 562 | putative pseudouridine synthase | ||
2 | guaA | 572..2137 [+], 1566 | GMP synthase/glutamine amidotransferase | ||
3 | - | 2553..3068 [+], 516 | unknown | ||
4 | - | 3192..3398 [+], 207 | HTH protein | ||
5 | Int | 3379..4461 [+], 1083 | DNA integrase | Integrase | |
6 | nikA | 4465..4785 [+], 321 | putative mobilization potein | ||
7 | - | 4793..5947 [+], 1155 | unknown | ||
8 | mob | 6458..7801 [+], 1344 | mobilization protein | Relaxase | |
9 | - | 8212..8514 [+], 303 | unknown | ||
10 | tet(W) | 8309..10228 [+], 1920 | ribosomal protection tetracycline resistance protein | AR | |
11 | - | 10773..11105 [-], 333 | unknown | ||
12 | - | 11766..12029 [+], 264 | unknown | ||
13 | - | 12047..12676 [+], 630 | unknown | ||
14 | doc | 12673..12999 [+], 327 | putative death on curing protein | ||
15 | pcrA | 13352..15958 [+], 2607 | helicase |
(1) Guedon G; Libante V; Coluzzi C; Payot S; Leblond-Bourget N (2017). The Obscure World of Integrative and Mobilizable Elements, Highly Widespread Elements that Pirate Bacterial Conjugative Systems. Genes (Basel). 8(11). [PudMed:29165361] |
(2) Bellanger X; Payot S; Leblond-Bourget N; Guedon G (2014). Conjugative and mobilizable genomic islands in bacteria: evolution and diversity. FEMS Microbiol Rev. 38(4):720-60. [PudMed:24372381] |
(3) Billington SJ; Songer JG; Jost BH (2002). Widespread distribution of a tet W determinant among tetracycline-resistant isolates of the animal pathogen Arcanobacterium pyogenes. Antimicrob Agents Chemother. 46(5):1281-7. [PudMed:11959557] |