ICEberg

IME
Gene list
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References

I. Information of IME

ICEberg ID	197_IME
Name	PGI1-PmESC
Family	-
Organism	Proteus mirabilis ESC
Size (bp)	42436 bp
GC content [Genome] (%)
Insertion site	3'-end of the trmE
Function	aadB, aadA2
Species that IME can be transferred to	-
Nucleotide Sequence	KU499917 (complete IME sequence in this contig)
Replicon	-
Coordinates	451..42886
Putative oriT region	-
Putative relaxase	-

II. IME interaction with ICE/CIME/Plasmids

The Interaction Network among ICE/IME/CIME/plasmid

Detailed Informatioin of the Interaction Network
#	IME	Inter_Ele [Type]	Methods	Donors	Recipients	Exper_Ref
1	PGI1-PmESC	pA/C₂ [IncA/C plasmid]	in trans	Proteus mirabilis	Enterobacter aerogenes 409-S1A1	27150396

This is an interactioin derived from experimental literature

The graph information of PGI1-PmESC components from KU499917

Complete gene list of PGI1-PmESC from KU499917
#	Gene	Coordinates [+/-], size (bp)	Product	*Reannotation
1	trmE	1..468 [+], 468	tRNA modification GTPase
2	int	671..1885 [+], 1215	phage integrase family protein
3	-	1882..2250 [-], 369	hypothetical protein
4	rep	2385..3626 [-], 1242	replication protein A
5	-	4241..6976 [-], 2736	mating pair stabilization protein	TraN_F, T4SS component
6	-	7063..7605 [-], 543	putative regulator protein
7	-	7608..7796 [-], 189	hypothetical protein
8	-	7968..8228 [+], 261	hypothetical protein
9	-	8279..8635 [-], 357	hypothetical protein
10	-	8632..12069 [-], 3438	sex pilus assembly protein	TraG_F, T4SS component
11	-	12278..13144 [+], 867	hypothetical protein
12	-	13409..15994 [+], 2586	helicase c2
13	-	16500..16937 [-], 438	hypothetical protein
14	-	17052..17243 [-], 192	hypothetical protein
15	-	17303..17572 [-], 270	hypothetical protein
16	-	17674..17991 [-], 318	hypothetical protein
17	-	18070..18324 [-], 255	hypothetical protein
18	-	18712..19008 [-], 297	hypothetical protein
19	-	19028..19993 [-], 966	phage integrase family protein
20	-	20083..20454 [+], 372	hypothetical protein
21	-	20182..20604 [-], 423	hypothetical protein
22	-	20680..20949 [+], 270	hypothetical protein
23	-	20939..23482 [-], 2544	Y4bN protein
24	-	23503..24492 [-], 990	AAA ATPase
25	res	24571..25155 [-], 585	resolvase
26	intI1	25428..26441 [-], 1014	IntI1 integrase	Integrase
27	aadB	26588..27121 [+], 534	aminoglycoside adenyltransferase	AR
28	aadA2	27179..27970 [+], 792	aminoglycoside adenyltransferase	AR
29	qacEdelta1	28134..28481 [+], 348	QacEdelta1
30	sul1	28475..29314 [+], 840	dihydropteroate synthase	AR
31	tnpA	29889..32855 [-], 2967	transposase
32	tnpR	32859..33419 [-], 561	resolvase
33	merR	33685..34119 [-], 435	MerR regulatory protein (repressor/inducer)
34	merT	34191..34541 [+], 351	mercury ion transport protein
35	merF	34824..35069 [+], 246	mercuric ion transport protein
36	merA	35066..36712 [+], 1647	mercuric ion reductase
37	merD	36729..37094 [+], 366	modulator protein
38	merE	37091..37327 [+], 237	MerE
39	urf-2	37324..37341 [+], 18	Urf-2
40	tniR	37380..37994 [-], 615	resolvase
41	tniQ	38055..39272 [-], 1218	hypothetical protein
42	tniB	39269..40177 [-], 909	putative ATP-binding protein
43	tniA	40180..41862 [-], 1683	transposase
44	-	42148..42777 [+], 630	hypothetical protein
45	hipB	43053..43245 [+], 193	transcriptional regulator

Flanking regions

Gene may contribute to site-specific recombination

Gene may play role in conjugative transfer

Gene may be involved in adaptative function

Element	No. of sequences	Download
Nucleotide sequences	1	Fasta
Proteins	43	Fasta

(1) Siebor E; de Curraize C; Amoureux L; Neuwirth C (2016). Mobilization of the Salmonella genomic island SGI1 and the Proteus genomic island PGI1 by the A/C2 plasmid carrying blaTEM-24 harboured by various clinical species of Enterobacteriaceae. J Antimicrob Chemother. 71(8):2167-70. [PudMed:27150396]