 ICEberg ID | 167_IME |
Name  | MGIPspArc1  |
| Family | - |
| Organism | Pseudoalteromonas sp. 4mar |
| Size (bp) | 25870 bp |
| GC content [Genome] (%) | |
| Insertion site | - |
| Function | - |
| Species that IME can be transferred to | - |
| Nucleotide Sequence | NZ_BADU01000066 (partical IME sequence) |
| Putative oriT region | - |
| Putative relaxase | - |
The graph information of MGIPspArc1 components from NZ_BADU01000066 | |||||
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| Incomplete gene list of MGIPspArc1 from NZ_BADU01000066 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product | *Reannotation | |
| 1 | P20311_RS07340 | 11389..12075 [-], 687 | hypothetical protein | ||
| 2 | P20311_RS07345 | 12543..14951 [-], 2409 | DNA helicase | ||
| 3 | P20311_RS07350 | 14977..15348 [-], 372 | transcriptional regulator | ||
| 4 | P20311_RS07355 | 15448..15753 [-], 306 | type II toxin-antitoxin system HigB family toxin | ||
| 5 | P20311_RS07360 | 15945..16283 [-], 339 | hypothetical protein | ||
| 6 | P20311_RS07365 | 16285..17535 [-], 1251 | site-specific integrase | Integrase | |
| 7 | P20311_RS07370 | 17851..18711 [-], 861 | YicC family protein | ||
| 8 | P20311_RS07375 | 18892..19605 [+], 714 | ribonuclease PH | ||
| 9 | P20311_RS07380 | 19620..20264 [+], 645 | orotate phosphoribosyltransferase | ||
 Flanking regions |
 Gene may contribute to site-specific recombination |
(1) Daccord A; Ceccarelli D; Rodrigue S; Burrus V (2013). Comparative analysis of mobilizable genomic islands. J Bacteriol. 195(3):606-14. [PudMed:23204461] 
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(2) Bian F; Xie BB; Qin QL; Shu YL; Zhang XY; Yu Y; Chen B; Chen XL; Zhou BC; Zhang YZ (2012). Genome sequences of six Pseudoalteromonas strains isolated from Arctic sea ice. J Bacteriol. 194(4):908-9. [PudMed:22275105]
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| experimental literature |
| in silico analysis literature |