I. Information of IME
ICEberg ID165_IME
Name MGIAspKor1 This is a predicted IME derived from literature
OrganismAlteromonas sp. SN2
Size (bp)23371 bp
GC content [Genome] (%)
Insertion site-
Species that IME can be transferred to-
Nucleotide SequenceCP002339 (partical IME sequence)
Putative oriT region -
Putative relaxase -

II. IME interaction with ICE/CIME/Plasmids

The interaction information of MGIAspKor1 is not available.

The graph information of MGIAspKor1 components from CP002339
Incomplete gene list of MGIAspKor1 from CP002339
#GeneCoordinates [+/-], size (bp) Product *Reannotation 
1ambt_219154906790..4907251 [+], 462hypothetical protein
2ambt_219204907305..4907487 [+], 183hypothetical protein
3ambt_219254907635..4908447 [+], 813hypothetical protein
4ambt_219304908473..4908730 [-], 258sirA protein
5pyrE4908733..4909374 [-], 642orotate phosphoribosyltransferase
6rph4909384..4910097 [-], 714ribonuclease PH
7ambt_219454910385..4911248 [+], 864hypothetical protein
8ambt_219504911600..4912856 [+], 1257phage integrase family site specific recombinaseIntegrase 
9ambt_219554912858..4913196 [+], 339hypothetical protein
10ambt_219604913392..4913694 [+], 303hypothetical protein
11ambt_219654913726..4914097 [+], 372helix-turn-helix domain-containing protein
12ambt_219804915161..4915841 [+], 681hypothetical protein
flank Flanking regions
integrase Gene may contribute to site-specific recombination

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
(1) Daccord A; Ceccarelli D; Rodrigue S; Burrus V (2013). Comparative analysis of mobilizable genomic islands. J Bacteriol. 195(3):606-14. [PudMed:23204461] experimental in_silico
(2) Math RK; Jin HM; Kim JM; Hahn Y; Park W; Madsen EL; Jeon CO (2012). Comparative genomics reveals adaptation by Alteromonas sp. SN2 to marine tidal-flat conditions: cold tolerance and aromatic hydrocarbon metabolism. PLoS One. 7(4):e35784. [PudMed:22563400]
experimental experimental literature
in_silico in silico analysis literature