I. Information of IME
ICEberg ID164_IME
Name MGIAmaMed1 This is a predicted IME derived from literature
OrganismAlteromonas macleodii Deep ecotype
Size (bp)24786 bp
GC content [Genome] (%)
Insertion site-
Species that IME can be transferred to-
Nucleotide SequenceCP001103 (partical IME sequence)
Putative oriT region -
Putative relaxase -

II. IME interaction with ICE/CIME/Plasmids

The interaction information of MGIAmaMed1 is not available.

The graph information of MGIAmaMed1 components from CP001103
Incomplete gene list of MGIAmaMed1 from CP001103
#GeneCoordinates [+/-], size (bp) Product *Reannotation 
1MADE_10109402439606..2440283 [+], 678phosphoglycolate phosphatase
2MADE_10109452440421..2441635 [+], 1215molybdopterin biosynthesis protein MoeA
3MADE_10109502441766..2443139 [+], 1374multidrug transporter MatE
4MADE_10109552443157..2444026 [-], 870isoquinoline 1-oxidoreductase
5MADE_0000010206754480899..1626 [+], -4479272chromosomal replication initiator protein DnaA
6MADE_10109602444046..2445227 [-], 1182VWA containing CoxE family protein
7MADE_10109652445227..2446063 [-], 837ATPase AAA
8MADE_10109702446334..2447299 [+], 966cysteine synthase A
9MADE_10109752447543..2448001 [+], 459hypothetical protein
10MADE_10109802448241..2448423 [+], 183hypothetical protein
11MADE_0000010221352448891..2449031 [-], 141transposase ISCps8
12MADE_10109852449024..2450064 [-], 1041transposase
flank Flanking regions

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
(1) Daccord A; Ceccarelli D; Rodrigue S; Burrus V (2013). Comparative analysis of mobilizable genomic islands. J Bacteriol. 195(3):606-14. [PudMed:23204461] experimental in_silico
(2) Lopez-Lopez A; Bartual SG; Stal L; Onyshchenko O; Rodriguez-Valera F (2005). Genetic analysis of housekeeping genes reveals a deep-sea ecotype of Alteromonas macleodii in the Mediterranean Sea. Environ Microbiol. 7(5):649-59. [PudMed:15819847]
experimental experimental literature
in_silico in silico analysis literature