ICEberg
I. Information of IME
ICEberg ID15_IME
Name IME_18RS21_oriT This is a predicted IME derived from literature
Family-
OrganismStreptococcus agalactiae 18RS21
Size (bp)6.4 kb
GC content [Genome] (%)
Insertion siteoriT from Tn916 and ICESt3-related ICEs
FunctionmerA, merR (mercury)
Species that IME can be transferred to-
Nucleotide Sequence-
Putative oriT region -
Putative relaxase -


II. IME interaction with ICE/CIME/Plasmids

The interaction information of IME_18RS21_oriT is not available.

 

The gene information of IME_18RS21_oriT is not available.
ElementNo. of sequencesDownload
Nucleotide sequences0Fasta
Proteins0Fasta
(1) Guedon G; Libante V; Coluzzi C; Payot S; Leblond-Bourget N (2017). The Obscure World of Integrative and Mobilizable Elements, Highly Widespread Elements that Pirate Bacterial Conjugative Systems. Genes (Basel). 8(11). [PudMed:29165361]
(2) Douarre PE; Sauvage E; Poyart C; Glaser P (2015). Host specificity in the diversity and transfer of lsa resistance genes in group B Streptococcus. J Antimicrob Chemother. 70(12):3205-13. [PudMed:26410170] experimental in_silico
(3) Puymege A; Bertin S; Guedon G; Payot S (2015). Analysis of Streptococcus agalactiae pan-genome for prevalence, diversity and functionality of integrative and conjugative or mobilizable elements integrated in the tRNA(Lys CTT) gene. Mol Genet Genomics. 290(5):1727-40. [PudMed:25832353] experimental in_silico
 
experimental experimental literature
in_silico in silico analysis literature

Genomics & Bioinformatics Group in MML, SJTU