I. Information of IME
ICEberg ID10_IME
Name ICE6180-RD.1 This is a predicted IME derived from literature
OrganismStreptococcus pyogenes MGAS6180
Size (bp)10545
GC content [Genome] (%)
Insertion site3′ of rumA (23S rRNA methyltransferase)
Species that IME can be transferred to-
Nucleotide SequenceCP000056 (complete IME sequence in this genome)
Genome coordinates1081126..1091670
Putative oriT region -
Putative relaxase coordinates: 1085573..1086802M28_Spy1083  Family:  MOBQ

II. IME interaction with ICE/CIME/Plasmids

The interaction information of ICE6180-RD.1 is not available.

Complete gene list of ICE6180-RD.1 from CP000056
#GeneCoordinates [+/-], size (bp) Product *Reannotation 
1M28_Spy10751076524..1077744 [-], 1221transporter, MFS superfamily
2M28_Spy10761078046..1079602 [+], 1557hypothetical cytosolic protein
3M28_Spy10771079707..1080108 [-], 402thioesterase superfamily protein
4M28_Spy10781080193..1080705 [-], 513phosphorylase, Pnp/Udp family
5M28_Spy10791081126..1082805 [-], 1680site-specific recombinaseIntegrase 
6M28_Spy10801082902..1083063 [-], 162hypothetical protein
7M28_Spy10811083761..1084489 [-], 729putative phage-associated protein
8M28_Spy10821084615..1085142 [-], 528hypothetical protein
9M28_Spy10831085573..1086802 [-], 1230nickaseRelaxase 
10M28_Spy10841087527..1087856 [-], 330hypothetical protein
11M28_Spy10851088343..1088768 [-], 426transcriptional regulator, MarR family
12M28_Spy10861089612..1089902 [-], 291hypothetical protein
13M28_Spy10871090007..1090624 [-], 618hypothetical cytosolic protein
14M28_Spy10881090692..1091114 [-], 423hypothetical protein
15M28_Spy10891091134..1091670 [-], 537hypothetical cytosolic protein
16M28_Spy10901091826..1093493 [-], 1668tRNA (uracil-5-)-methyltransferase
17M28_Spy10911093542..1094993 [-], 1452transcriptional regulator, LytR family
18aroK1095201..1095692 [-], 492shikimate kinase
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
(1) Bellanger X; Payot S; Leblond-Bourget N; Guedon G (2014). Conjugative and mobilizable genomic islands in bacteria: evolution and diversity. FEMS Microbiol Rev. 38(4):720-60. [PudMed:24372381]
(2) Beres SB; Musser JM (2007). Contribution of exogenous genetic elements to the group A Streptococcus metagenome. PLoS One. 2(8):e800. [PudMed:17726530]