I. Information of CIME
NameCIME_515_rpsI This is a predicted CIME derived from literature
OrganismStreptococcus agalactiae 515
Size (bp)
GC content [Genome] (%)
Insertion siterpsI
Species that CIME can be transferred to-
Nucleotide SequenceAAJP01000026; AAJP01000024 (partical CIME sequence)

II. CIME interaction with ICE/IME

The interaction information of CIME_515_rpsI is not available.

The graph information of CIME_515_rpsI components from AAJP01000026
Incomplete gene list of CIME_515_rpsI from AAJP01000026
#GeneCoordinates [+/-], size (bp) Product *Reannotation 
1SAL_024612086..12604 [+], 519YacP
2SAL_024712697..13557 [+], 861DegV family protein
3SAL_024813903..14022 [+], 120conserved hypothetical protein
4SAL_024914095..14217 [+], 123transcriptional regulator, Cro/CI family
5SAL_025014532..15698 [-], 1167transposase, IS30 family, putative, truncation
6rplM15999..16445 [+], 447ribosomal protein L13
7rpsI16466..16858 [+], 393ribosomal protein S9
8SAL_025317004..18158 [-], 1155site-specific recombinase, phage integrase familyIntegrase 
9SAL_025418213..18731 [-], 519putative transcriptional regulator, Cro/CI family
10SAL_025518878..19162 [+], 285conserved hypothetical protein
11SAL_025619174..20028 [+], 855protein gp49-like protein
12SAL_025720039..20329 [+], 291conserved hypothetical protein
13SAL_025820322..20687 [+], 366Tn5252, Orf 9 protein
14SAL_025920684..21040 [+], 357Tn5252, Orf 9 protein
15SAL_026021384..23708 [+], 2325type I restriction-modification system, R subunit
16SAL_026123721..25184 [+], 1464N-6 DNA Methylase family
17SAL_026225184..25734 [+], 551type I restriction-modification system, S subunit

The graph information of CIME_515_rpsI components from AAJP01000024
Incomplete gene list of CIME_515_rpsI from AAJP01000024
#GeneCoordinates [+/-], size (bp) Product *Reannotation 
1SAL_0263460..2031 [+], 1572putative helicase
2SAL_02642144..3487 [+], 1344hypothetical protein
3SAL_02654268..4558 [+], 291Unknown
4SAL_02664660..5067 [+], 408Unknown
5SAL_02675067..5654 [+], 588Unknown
6SAL_02685600..5767 [+], 168conserved hypothetical protein
7SAL_02696033..6278 [+], 246conserved hypothetical protein
8SAL_02706263..6649 [+], 387Unknown
9SAL_02716683..6964 [+], 282Unknown
10SAL_02727055..7153 [+], 99conserved hypothetical protein
11SAL_02737581..7685 [+], 105conserved hypothetical protein
12SAL_02747682..7807 [+], 126conserved hypothetical protein
13SAL_02757807..8667 [+], 861transcriptional regulator, MutR family
14SAL_02768740..9324 [+], 585putative transporter
15SAL_02779390..9725 [+], 336putative transporter
16SAL_02789747..9920 [+], 174putative transporter
17SAL_02799982..10632 [-], 651amino acid ABC transporter, permease protein
18SAL_028010633..11559 [-], 927amino acid ABC transporter, amino acid-binding protein
flank Flanking regions
integrase Gene may contribute to site-specific recombination

ElementNo. of sequencesDownload
Nucleotide sequences2Fasta
(1) Brochet M; Couve E; Glaser P; Guedon G; Payot S (2008). Integrative conjugative elements and related elements are major contributors to the genome diversity of Streptococcus agalactiae. J Bacteriol. 190(20):6913-7. [PudMed:18708498] experimental in_silico
experimental experimental literature
in_silico in silico analysis literature