 ICEberg ID | 8_CIME |
| Name | CIME_515_rpmG  |
| Family | - |
| Organism | Streptococcus agalactiae 515 |
| Size (bp) | |
| GC content [Genome] (%) | |
| Insertion site | rpmG |
| Function | - |
| Species that CIME can be transferred to | - |
| Nucleotide Sequence | AAJP01000119; AAJP01000008 (partical CIME sequence) |
The graph information of CIME_515_rpmG components from AAJP01000119 | |||||
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| Incomplete gene list of CIME_515_rpmG from AAJP01000119 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product | *Reannotation  | |
| 1 | SAL_2220 | 35..217 [-], 183 | Unknown | ||
| 2 | SAL_2221 | 247..585 [-], 339 | putative cadmium efflux system accessory protein | ||
| 3 | SAL_2222 | 597..1211 [-], 615 | cadmium resistance protein | ||
| 4 | rpmG | 1503..1652 [-], 150 | ribosomal protein L33 | ||
| 5 | rpmF | 1668..1850 [-], 183 | ribosomal protein L32 | ||
| 6 | SAL_2225 | 2195..2273 [+], 79 | histidyl-tRNA synthetase | ||
The graph information of CIME_515_rpmG components from AAJP01000008 | |||||
 | |||||
| Incomplete gene list of CIME_515_rpmG from AAJP01000008 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product | *Reannotation | |
| 1 | SAL_2151 | 1..1366 [+], 1366 | Unknown | ||
| 2 | SAL_2152 | 1687..2136 [+], 450 | conserved hypothetical protein | ||
| 3 | SAL_2153 | 2338..2658 [+], 321 | Unknown | ||
| 4 | SAL_2154 | 2658..3758 [+], 1101 | Unknown | T4CP | |
| 5 | SAL_2155 | 3755..4360 [+], 606 | conserved hypothetical protein | ||
| 6 | SAL_2156 | 4566..5171 [+], 606 | Plasmid replication protein | ||
| 7 | SAL_2157 | 5164..5412 [+], 249 | conserved hypothetical protein | ||
| 8 | SAL_2158 | 5502..6767 [+], 1266 | putative integrase/recombinase, phage integrase family | Integrase | |
| 9 | SAL_2159 | 7115..7786 [+], 672 | conserved hypothetical protein | ||
| 10 | SAL_2160 | 7871..8542 [+], 672 | DNA-binding response regulator | ||
| 11 | SAL_2161 | 8526..9890 [+], 1365 | sensor histidine kinase | ||
| 12 | SAL_2162 | 10000..11553 [-], 1554 | putative membrane protein | ||
 Flanking regions |
 Gene may contribute to site-specific recombination |
 Gene may play role in conjugative transfer |
(1) Brochet M; Couve E; Glaser P; Guedon G; Payot S (2008). Integrative conjugative elements and related elements are major contributors to the genome diversity of Streptococcus agalactiae. J Bacteriol. 190(20):6913-7. [PudMed:18708498] 
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| experimental literature |
| in silico analysis literature |