ICEberg
I. Information of CIME
ICEberg ID229_CIME
NameCIME455 This is a predicted CIME derived from literature
Family-
OrganismStreptococcus thermophilus CNRZ455
Size (bp)
GC content [Genome] (%)
Insertion sitefda
Function-
Species that CIME can be transferred to-
Nucleotide SequenceAJ278471 (partical CIME sequence)


II. CIME interaction with ICE/IME

The interaction information of CIME455 is not available.


The graph information of CIME455 components from AJ278471
Incomplete gene list of CIME455 from AJ278471
#GeneCoordinates [+/-], size (bp) Product *Reannotation 
1-1752..2936 [-], 1185putative Abi-alpha protein
2gst3491..4708 [+], 1218putative glutamate/aspartate-proton symport protein
3-4728..5657 [+], 930putative carboxylate-amine/thiol ligase
4-5841..7016 [-], 1176putative transposase
5-9382..10515 [-], 1134putative ATP/GTP-binding protein
6-10516..11286 [-], 771hypothetical protein
7-11316..11339 [-], 24ORFV1 protein
 
flank Flanking regions

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins1Fasta
(1) Pavlovic G; Burrus V; Gintz B; Decaris B; Guedon G (2004). Evolution of genomic islands by deletion and tandem accretion by site-specific recombination: ICESt1-related elements from Streptococcus thermophilus. Microbiology. 150(Pt 4):759-74. [PudMed:15073287] experimental
 
experimental experimental literature

Genomics & Bioinformatics Group in MML, SJTU