ICEberg

ICE
Gene list
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References

I. Information of ICE

ICEberg ID	976
Name	ICEKkKWG1
Organism	Kingella kingae KWG1
Size (bp)	72676
GC content [Genome] (%)	49.12
Insertion site	tRNAMet
Function	Resistance to sulfonamides, streptomycin, tetracycline
Species that ICE can be transferred to	-
Nucleotide Sequence	LN869922 (complete ICE sequence in this genome)
Replicon	-
Genome coordinates	850916..923591
Putative oriT region	-
Putative relaxase	coordinates: 878208..879479; Locus tag: KKKWG1_0929; Family: MOB_V

II. ICE interaction with IME/CIME/

The interaction information of ICEKkKWG1 is not available.

The graph information of ICEKkKWG1 components from LN869922

Complete gene list of ICEKkKWG1 from LN869922
#	Gene	Coordinates [+/-], size (bp)	Product (GenBank annotation)	*Reannotation
1	dnaG	846108..847871 [-], 1764	DNA primase
2	KKKWG1_0903	847971..849143 [-], 1173	conserved protein of unknown function
3	KKKWG1_0904	850916..851464 [-], 549	conserved protein of unknown function
4	traL	851451..852194 [-], 744	Protein TraL
5	trbM	852373..852915 [-], 543	TrbM	MagB14, T4SS component
6	KKKWG1_0907	853617..854255 [+], 639	conserved membrane protein of unknown function
7	KKKWG1_0908	854677..855135 [+], 459	conserved protein of unknown function
8	KKKWG1_0909	855839..856228 [-], 390	conserved protein of unknown function
9	KKKWG1_0910	856895..857209 [-], 315	DNA-binding helix-turn-helix protein
10	KKKWG1_0911	857193..857573 [-], 381	conserved protein of unknown function
11	KKKWG1_0912	857673..858275 [-], 603	DNA-binding helix-turn-helix protein
12	KKKWG1_0913	858604..859422 [+], 819	conserved protein of unknown function
13	KKKWG1_0914	859948..860955 [+], 1008	transposase, IS5 family, ISNme1
14	KKKWG1_0915	861187..863475 [+], 2289	conserved exported protein of unknown function
15	KKKWG1_0916	863675..864952 [-], 1278	conserved protein of unknown function
16	KKKWG1_0917	864991..865734 [-], 744	Phage protein Gp37/Gp68
17	KKKWG1_0918	867187..867918 [+], 732	conserved protein of unknown function
18	KKKWG1_0919	869015..869545 [-], 531	Bacterial mobilization protein MobC
19	KKKWG1_0920	869617..869997 [-], 381	Recombination-associated protein RdgC (fragment)
20	strB	870235..871071 [-], 837	Streptomycin phosphotransferase B
21	strA	871071..871874 [-], 804	Streptomycin 3''-kinase
22	sulII	871935..872750 [-], 816	Dihydropteroate synthase type-2	AR
23	repC	873060..873869 [-], 810	RepC
24	blaT	873985..874845 [-], 861	Beta-lactamase TEM	AR
25	tnpR	875028..875585 [-], 558	Transposon Tn3 resolvase
26	rep	875919..876848 [-], 930	Replication protein
27	KKKWG1_0928	876898..877704 [+], 807	Integrase core domain protein	Integrase
28	pre	878208..879479 [-], 1272	Plasmid recombination enzyme	Relaxase, MOB_V Family
29	strB	880654..881490 [-], 837	Streptomycin phosphotransferase B	AR
30	strA	881490..882374 [-], 885	Streptomycin 3''-kinase	AR
31	KKKWG1_0931	882447..883655 [+], 1209	transposase, IS4 family, IS10
32	tetD	883665..884081 [-], 417	Transposon Tn10 TetD protein
33	tetC	884094..884762 [+], 669	Transposon Tn10 TetC protein
34	tetA	884875..886080 [-], 1206	Tetracycline resistance protein, class B	AR
35	tetR	886162..886737 [+], 576	Tetracycline repressor protein class B from transposon Tn10
36	jemC	886762..887385 [-], 624	conserved protein of unknown function
37	KKKWG1_0937	887456..887842 [-], 387	conserved protein of unknown function
38	jemB	887835..888134 [-], 300	conserved protein of unknown function
39	jemA	888599..889804 [+], 1206	glutamate transporter
40	KKKWG1_0940	890170..891378 [-], 1209	transposase, IS4 family, IS10
41	tnpR	891514..892128 [-], 615	putative resolvase TnpR for transposon Tn5393
42	tnpA	892254..895139 [+], 2886	Transposase TnpA for transposon Tn5393
43	KKKWG1_0943	895053..895559 [-], 507	protein of unknown function
44	traS	895562..896680 [-], 1119	TraS relaxase
45	KKKWG1_0945	896779..902313 [-], 5535	Toprim domain protein
46	KKKWG1_0946	902333..904372 [-], 2040	TraG/TraD family protein	VirD4 , T4SS component
47	ssb	904467..904880 [-], 414	Single-stranded DNA-binding protein 1
48	KKKWG1_0948	905223..905486 [-], 264	conserved protein of unknown function
49	KKKWG1_0949	905618..905983 [-], 366	conserved protein of unknown function
50	KKKWG1_0950	905980..906753 [-], 774	conserved protein of unknown function
51	KKKWG1_0951	906798..907319 [-], 522	conserved protein of unknown function
52	KKKWG1_0952	907316..908230 [-], 915	conserved protein of unknown function
53	KKKWG1_0953	907999..908325 [-], 327	conserved membrane protein of unknown function
54	KKKWG1_0954	908380..908844 [-], 465	conserved exported protein of unknown function
55	virB11	909004..910104 [-], 1101	P-type DNA transfer ATPase VirB11	VirB11, T4SS component
56	virB10	910190..911464 [-], 1275	Bacterial conjugation TrbI-like protein	VirB10, T4SS component
57	virB9	911461..912300 [-], 840	putative P-type conjugative transfer protein VirB9	VirB9, T4SS component
58	virB8	912313..913056 [-], 744	VirB8 protein	VirB8, T4SS component
59	virB7	913275..913754 [-], 480	conserved protein of unknown function
60	virB6	913786..914748 [-], 963	TrbL/VirB6 plasmid conjugal transfer protein
61	virB5	914808..915446 [-], 639	Type IV secretion system protein	VirB5, T4SS component
62	virB4	915548..918103 [-], 2556	Type IV secretion/conjugal transfer ATPase, VirB4 family	VirB4, T4SS component
63	virB3	918015..918443 [-], 429	Type IV secretory pathway, VirB3-like protein	VirB3, T4SS component
64	virB2	918464..918784 [-], 321	conserved membrane protein of unknown function
65	virB1	918941..919747 [-], 807	Type IV secretion system protein virB1	VirB1, T4SS component
66	KKKWG1_0966	920122..920250 [-], 129	protein of unknown function
67	KKKWG1_0967	920342..920578 [+], 237	transposase ISKki1 ORF A
68	KKKWG1_0968	920606..921172 [+], 567	transposase ISKki1 ORF B
69	KKKWG1_0969	921179..922090 [-], 912	Putative site-specific recombinase, phage integrase family
70	KKKWG1_0970	922112..922399 [-], 288	conserved protein of unknown function
71	KKKWG1_0971	922408..922743 [-], 336	Replication protein A (fragment)
72	KKKWG1_0972	922761..923327 [-], 567	transposase ISKki1 ORF B
73	KKKWG1_0973	923355..923591 [-], 237	transposase ISKki1 ORF A
74	KKKWG1_0974	923856..924728 [-], 873	conserved membrane protein of unknown function
75	KKKWG1_0975	924783..925094 [+], 312	conserved protein of unknown function
76	fixS	925096..925272 [+], 177	Cytochrome oxidase maturation protein, cbb3-type
77	KKKWG1_0977	925229..926548 [+], 1320	Major facilitator superfamily MFS_1 transporter
78	yadR	926609..926947 [-], 339	putative chaperone involved in Fe-S cluster assembly and activation; hesB-like

Flanking regions

Element	No. of sequences	Download
Nucleotide sequences	1	Fasta
Proteins	71	Fasta

(1) Bidet P; Basmaci R; Guglielmini J; Doit C; Jost C; Birgy A; Bonacorsi S (2016). Genome Analysis of Kingella kingae Strain KWG1 Reveals How a beta-Lactamase Gene Inserted in the Chromosome of This Species. Antimicrob Agents Chemother. 60(1):703-8. [PubMed:26574009]

in silico analysis literature