ICEberg
I. Information of ICE
ICEberg ID954
Name ICEAfe2 This is a predicted ICE derived from literature
OrganismAcidithiobacillus ferrooxidans ATCC 23270
Size (bp)76 kb and 159 kb in ATCC 23270 and ATCC 53993 respectively
GC content [Genome] (%)-
Insertion sitetRNA-Val
Function-
Species that ICE can be transferred to-
Nucleotide SequenceNC_011761 (ICE sequence without defined boundaries)
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICEAfe2 is not available.

 

The gene information of ICEAfe2 is not available.
ElementNo. of sequencesDownload
Nucleotide sequences0Fasta
Proteins0Fasta
(1) Castillo A; Tello M; Ringwald K; Acuna LG; Quatrini R; Orellana O (2017). A DNA segment encoding the anticodon stem/loop of tRNA determines the specific recombination of integrative-conjugative elements in Acidithiobacillus species. RNA Biol. :1-8. [PubMed:29168417]
(2) Bustamante P; Tello M; Orellana O (2014). Toxin-antitoxin systems in the mobile genome of Acidithiobacillus ferrooxidans. PLoS One. 9(11):e112226. [PubMed:25384039] experimental in_silico
 
experimental experimental literature
in_silico in silico analysis literature

Genomics & Bioinformatics Group in MML, SJTU