I. Information of ICE

ICEberg ID	95
Name	Tn5252 (part of Tn5253)
ICEO ID	ICEO_0000704
Organism	Streptococcus pneumoniae BM6001
Size (bp)	~47.5 kb
GC content [Genome] (%)	-
Insertion site	-
Function	UV Resistance
Species that ICE can be transferred to	Streptococcus pneumoniae
Nucleotide Sequence	AF295925 (partial ICE sequence)
Putative oriT region	-
Putative relaxase	-

II. ICE interaction with IME/CIME/

The interaction information of Tn5252 (part of Tn5253) is not available.

The graph information of Tn5252 (part of Tn5253) components from AF295925
Incomplete gene list of Tn5252 (part of Tn5253) from AF295925
#	Gene	Coordinates [+/-], size (bp)	Product  (GenBank annotation)	*Reannotation
1	-	452..1567 [-], 1116	Orf28	PrgK, T4SS component
2	-	1651..3210 [-], 1560	Orf27
3	-	3293..5656 [-], 2364	Orf26	PrgJ, T4SS component
4	-	5601..5957 [-], 357	Orf25
5	-	6011..6244 [-], 234	Orf24
6	-	6445..6753 [-], 309	Orf23	PrgH, T4SS component
7	-	6939..7136 [-], 198	Orf22
8	-	7204..8619 [-], 1416	Orf21	T4CP
9	-	8715..9053 [-], 339	Orf20

(1) Srinivas P; Vijayakumar MN (2000). Genetic and transcriptional analysis of a regulatory region in streptococcal conjugative transposon Tn5252. Plasmid. 44(3):262-74. [PubMed:11078652]

(2) Munoz-Najar U; Vijayakumar MN (1999). An operon that confers UV resistance by evoking the SOS mutagenic response in streptococcal conjugative transposon Tn5252. J Bacteriol. 181(9):2782-8. [PubMed:10217768]

(3) Vijayakumar MN; Kilic AO; Srinivas P (1995). Genetic organization of streptococcal conjugative transposon Tn5252. Dev Biol Stand. 85:63-9. [PubMed:8586242]

(4) Vijayakumar MN; Ayalew S (1993). Nucleotide sequence analysis of the termini and chromosomal locus involved in site-specific integration of the streptococcal conjugative transposon Tn5252. J Bacteriol. 175(9):2713-9. [PubMed:8386725]

(5) Kilic AO; Vijayakumar MN; al-Khaldi SF (1994). Identification and nucleotide sequence analysis of a transfer-related region in the streptococcal conjugative transposon Tn5252. J Bacteriol. 176(16):5145-50. [PubMed:8051031]

(6) Ayoubi P; Kilic AO; Vijayakumar MN (1991). Tn5253, the pneumococcal omega (cat tet) BM6001 element, is a composite structure of two conjugative transposons, Tn5251 and Tn5252. J Bacteriol. 173(5):1617-22. [PubMed:1847905]

experimental literature