The graph information of ICEAcaSM.2 components from NC_015850 |
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Complete gene list of ICEAcaSM.2 from NC_015850 |
# | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation |
1 | ATC_RS05510 | 1107514..1108419 [-], 906 | extracellular solute-binding protein | |
2 | ATC_RS05515 | 1109005..1109289 [-], 285 | hypothetical protein | |
3 | ATC_RS05520 | 1110642..1111646 [+], 1005 | Fic family protein | |
4 | ATC_RS05525 | 1111830..1112162 [+], 333 | hypothetical protein | |
5 | ATC_RS05535 | 1112583..1113797 [+], 1215 | ISL3 family transposase | |
6 | ATC_RS05540 | 1113799..1114032 [+], 234 | hypothetical protein | |
7 | ATC_RS05545 | 1114019..1116418 [+], 2400 | DEAD/DEAH box helicase | |
8 | ATC_RS05550 | 1117121..1117495 [+], 375 | hypothetical protein | |
9 | ATC_RS05555 | 1117497..1117796 [+], 300 | hypothetical protein | |
10 | ATC_RS05560 | 1117887..1119131 [+], 1245 | potassium channel protein | |
11 | ATC_RS05565 | 1119301..1119567 [-], 267 | hypothetical protein | |
12 | ATC_RS05570 | 1119912..1120181 [-], 270 | hypothetical protein | |
13 | ATC_RS05575 | 1120287..1120682 [+], 396 | hypothetical protein | |
14 | ATC_RS05580 | 1120679..1122862 [+], 2184 | ATP-dependent RecD-like DNA helicase | TraI_F, T4SS component |
15 | ATC_RS05585 | 1122935..1123504 [-], 570 | ANTAR domain-containing protein | |
16 | ATC_RS16340 | 1123510..1123869 [-], 360 | cobalamin biosynthesis protein CbiX | |
17 | ATC_RS05590 | 1123866..1124657 [-], 792 | uroporphyrinogen-III C-methyltransferase | |
18 | ATC_RS05595 | 1124671..1125717 [-], 1047 | DNA-binding protein YbiB | |
19 | ATC_RS05600 | 1125684..1128446 [-], 2763 | nitrate reductase | |
20 | ATC_RS05605 | 1128443..1128763 [-], 321 | nitrite reductase (NAD(P)H) small subunit | |
21 | ATC_RS05610 | 1128768..1131215 [-], 2448 | NAD(P)/FAD-dependent oxidoreductase | |
22 | ATC_RS05615 | 1131436..1132680 [-], 1245 | hypothetical protein | |
23 | ATC_RS05620 | 1132751..1134151 [-], 1401 | NarK/NasA family nitrate transporter | |
24 | ATC_RS05625 | 1134443..1135612 [-], 1170 | nitrate transporter | |
25 | ATC_RS15960 | 1135821..1136384 [-], 564 | hypothetical protein | |
26 | ATC_RS05635 | 1136499..1137455 [+], 957 | IS5 family transposase | |
27 | ATC_RS05640 | 1138049..1138396 [+], 348 | hypothetical protein | |
28 | ATC_RS05645 | 1138477..1140633 [+], 2157 | SAM-dependent DNA methyltransferase | |
29 | ATC_RS05650 | 1140630..1141265 [+], 636 | GIY-YIG nuclease family protein | |
30 | ATC_RS05655 | 1141316..1142605 [+], 1290 | restriction endonuclease subunit S | |
31 | ATC_RS05660 | 1142602..1143495 [+], 894 | hypothetical protein | |
32 | ATC_RS16345 | 1143984..1144523 [+], 540 | hypothetical protein | |
33 | ATC_RS05670 | 1144578..1145795 [+], 1218 | ISL3-like element ISAtc2 family transposase | |
34 | ATC_RS05675 | 1146388..1146804 [+], 417 | hypothetical protein | |
35 | ATC_RS05680 | 1147175..1148698 [+], 1524 | IS21 family transposase | Integrase |
36 | ATC_RS05685 | 1148707..1149492 [+], 786 | ATP-binding protein | |
37 | ATC_RS05690 | 1149787..1150050 [+], 264 | type II toxin-antitoxin system Phd/YefM family antitoxin | |
38 | ATC_RS05695 | 1150338..1150562 [+], 225 | hypothetical protein | |
39 | ATC_RS05700 | 1150577..1151122 [+], 546 | type II toxin-antitoxin system MqsA family antitoxin | |
40 | ATC_RS05705 | 1151119..1151571 [+], 453 | hypothetical protein | |
41 | ATC_RS05710 | 1151550..1154726 [+], 3177 | type I restriction endonuclease subunit R | |
42 | ATC_RS05715 | 1155179..1155358 [+], 180 | hypothetical protein | |
43 | ATC_RS05720 | 1155376..1155639 [-], 264 | hypothetical protein | |
44 | ATC_RS05725 | 1156723..1157664 [+], 942 | GTP-binding protein | |
45 | ATC_RS05730 | 1157666..1158433 [+], 768 | phosphatase | |
46 | ATC_RS16350 | 1158656..1159000 [+], 345 | hypothetical protein | |
47 | ATC_RS05740 | 1159046..1159552 [+], 507 | single-stranded DNA-binding protein | |
48 | ATC_RS05750 | 1159728..1159943 [+], 216 | hypothetical protein | |
49 | ATC_RS05755 | 1159943..1160551 [+], 609 | uracil-DNA glycosylase | |
50 | ATC_RS05760 | 1160618..1160977 [+], 360 | hypothetical protein | |
51 | ATC_RS05765 | 1161126..1161542 [+], 417 | hypothetical protein | |
52 | ATC_RS05770 | 1161852..1162649 [+], 798 | metallophosphoesterase | |
53 | ATC_RS05775 | 1162860..1163390 [+], 531 | hypothetical protein | |
54 | ATC_RS05780 | 1163456..1163986 [+], 531 | hypothetical protein | |
55 | ATC_RS05785 | 1164023..1164427 [+], 405 | hypothetical protein | |
56 | ATC_RS05790 | 1164486..1164755 [+], 270 | hypothetical protein | |
57 | ATC_RS05795 | 1164760..1165074 [+], 315 | hypothetical protein | |
58 | ATC_RS05800 | 1165221..1168982 [-], 3762 | restriction-modification protein | |
59 | ATC_RS05805 | 1169014..1169445 [-], 432 | hypothetical protein | |
60 | ATC_RS05810 | 1169552..1169926 [+], 375 | hypothetical protein | |
61 | ATC_RS05815 | 1170012..1170539 [+], 528 | hypothetical protein | |
62 | ATC_RS05820 | 1170578..1171564 [+], 987 | P-type conjugative transfer ATPase TrbB | TrbB, T4SS component |
63 | ATC_RS05825 | 1171710..1172501 [+], 792 | hypothetical protein | |
64 | ATC_RS05830 | 1173219..1173821 [+], 603 | hypothetical protein | TrbN, T4SS component |
65 | ATC_RS05835 | 1174104..1175738 [+], 1635 | PilN family type IVB pilus formation outer membrane protein | |
66 | ATC_RS05840 | 1175738..1177096 [+], 1359 | hypothetical protein | |
67 | ATC_RS05845 | 1177318..1177887 [+], 570 | type IV pilus biogenesis protein PilP | |
68 | ATC_RS05850 | 1177889..1179517 [+], 1629 | secretion system protein E | TraJ_I, T4SS component |
69 | ATC_RS05855 | 1179517..1180617 [+], 1101 | membrane protein | |
70 | ATC_RS05860 | 1180654..1181130 [+], 477 | hypothetical protein | |
71 | ATC_RS05865 | 1181139..1182089 [+], 951 | PilU | TraJ_I, T4SS component |
72 | ATC_RS16355 | 1182286..1182816 [+], 531 | hypothetical protein | |
73 | ATC_RS15965 | 1182829..1184343 [+], 1515 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | |
74 | ATC_RS05875 | 1184351..1184719 [-], 369 | type II toxin-antitoxin system HicB family antitoxin | |
75 | ATC_RS05880 | 1184716..1184976 [-], 261 | type II toxin-antitoxin system HicA family toxin | |
76 | ATC_RS05885 | 1185481..1185873 [+], 393 | hypothetical protein | |
77 | ATC_RS05890 | 1185892..1186263 [+], 372 | hypothetical protein | TrbD, T4SS component |
78 | ATC_RS05895 | 1186266..1189769 [+], 3504 | conjugal transfer protein TrbE | TrbE, T4SS component |
79 | ATC_RS05900 | 1190048..1190242 [+], 195 | type II toxin-antitoxin system HicA family toxin | |
80 | ATC_RS05905 | 1190239..1190640 [+], 402 | type II toxin-antitoxin system HicB family antitoxin | |
81 | ATC_RS05910 | 1191076..1191909 [+], 834 | hypothetical protein | |
82 | ATC_RS05915 | 1192358..1192702 [+], 345 | hypothetical protein | |
83 | ATC_RS05920 | 1192678..1193295 [+], 618 | hypothetical protein | |
84 | ATC_RS05925 | 1193371..1194522 [+], 1152 | hypothetical protein | |
85 | ATC_RS16360 | 1194544..1194693 [+], 150 | hypothetical protein | |
86 | ATC_RS15970 | 1194811..1194996 [-], 186 | hypothetical protein | |
87 | ATC_RS05930 | 1194995..1195774 [+], 780 | conjugative transfer protein TrbJ | |
88 | ATC_RS05935 | 1195784..1197685 [+], 1902 | P-type conjugative transfer protein TrbL | |
89 | ATC_RS05940 | 1197765..1198025 [+], 261 | hypothetical protein | |
90 | ATC_RS05945 | 1198177..1200771 [-], 2595 | hypothetical protein | |
91 | ATC_RS05950 | 1200776..1202491 [-], 1716 | site-specific DNA-methyltransferase | |
92 | ATC_RS05955 | 1202805..1204517 [-], 1713 | DUF2326 domain-containing protein | |
93 | ATC_RS05960 | 1204514..1204807 [-], 294 | hypothetical protein | |
94 | ATC_RS05965 | 1204829..1205119 [-], 291 | hypothetical protein | |
95 | ATC_RS05970 | 1205460..1207103 [+], 1644 | transposase | |
96 | ATC_RS05975 | 1207078..1207629 [-], 552 | hypothetical protein | |
97 | ATC_RS05980 | 1207646..1207885 [-], 240 | hypothetical protein | |
98 | ATC_RS05985 | 1208239..1208493 [+], 255 | hypothetical protein | |
99 | ATC_RS05990 | 1208490..1208747 [+], 258 | hypothetical protein | |
100 | ATC_RS05995 | 1208782..1209915 [+], 1134 | conjugal transfer protein TraB | |
101 | ATC_RS06000 | 1210487..1211179 [+], 693 | type IV secretion system protein | TrbF, T4SS component |
102 | ATC_RS06005 | 1211515..1212438 [+], 924 | conjugal transfer protein TrbG | TrbG, T4SS component |
103 | ATC_RS06010 | 1212442..1213758 [+], 1317 | TrbI protein | TrbI, T4SS component |
104 | ATC_RS06015 | 1213771..1214064 [+], 294 | hypothetical protein | |
105 | ATC_RS06020 | 1214068..1215162 [+], 1095 | ParA family protein | |
106 | ATC_RS06025 | 1215159..1216451 [+], 1293 | ParB/RepB/Spo0J family partition protein | |
107 | ATC_RS16365 | 1216366..1218039 [-], 1674 | hypothetical protein | |
108 | ATC_RS06035 | 1218029..1218472 [-], 444 | hypothetical protein | |
109 | ATC_RS06040 | 1218482..1219420 [-], 939 | phage antirepressor Ant | |
110 | ATC_RS16370 | 1219521..1220159 [-], 639 | hypothetical protein | |
111 | ATC_RS06050 | 1220444..1223020 [+], 2577 | conjugal transfer protein TraG | T4CP |
112 | ATC_RS06055 | 1223355..1223735 [+], 381 | hypothetical protein | |
113 | ATC_RS06060 | 1223799..1224044 [-], 246 | hypothetical protein | |
114 | ATC_RS06065 | 1224245..1225432 [-], 1188 | DNA polymerase III subunit beta | |
115 | ATC_RS06070 | 1225635..1226216 [-], 582 | peptidase M56 | TrbN, T4SS component |
116 | ATC_RS06075 | 1226535..1230521 [-], 3987 | hypothetical protein | |
117 | ATC_RS06080 | 1230514..1233429 [-], 2916 | hypothetical protein | |
118 | ATC_RS06085 | 1233644..1234111 [+], 468 | hypothetical protein | |
119 | ATC_RS06090 | 1235295..1236269 [-], 975 | hypothetical protein | |
120 | ATC_RS06095 | 1237105..1237560 [-], 456 | type I-E CRISPR-associated protein Cas6/Cse3/CasE | |
121 | ATC_RS06100 | 1237557..1238339 [-], 783 | hypothetical protein | |
122 | ATC_RS06105 | 1238339..1239022 [-], 684 | hypothetical protein | |
123 | ATC_RS06110 | 1239007..1241187 [-], 2181 | ATP-dependent DNA helicase DinG | |
124 | ATC_RS06115 | 1241498..1241722 [-], 225 | superinfection immunity protein | |
125 | ATC_RS06120 | 1241753..1241989 [-], 237 | hypothetical protein | |
126 | ATC_RS06125 | 1242010..1242900 [-], 891 | hypothetical protein | |
127 | ATC_RS06130 | 1242906..1244369 [-], 1464 | site-specific DNA-methyltransferase | |
128 | ATC_RS06135 | 1244362..1245060 [-], 699 | acyltransferase | |
129 | ATC_RS06140 | 1245060..1245539 [-], 480 | hypothetical protein | |
130 | ATC_RS06145 | 1245836..1246429 [-], 594 | hypothetical protein | |
131 | ATC_RS06150 | 1246433..1247029 [-], 597 | hypothetical protein | |
132 | ATC_RS06155 | 1247029..1247574 [-], 546 | hypothetical protein | |
133 | ATC_RS06160 | 1247869..1248057 [-], 189 | hypothetical protein | |
134 | ATC_RS06170 | 1249446..1249979 [-], 534 | hypothetical protein | |
135 | ATC_RS06175 | 1250080..1250463 [-], 384 | hypothetical protein | |
136 | ATC_RS06180 | 1250500..1250736 [-], 237 | hypothetical protein | |
137 | ATC_RS06185 | 1250735..1251016 [+], 282 | hypothetical protein | |
138 | ATC_RS06190 | 1251261..1251500 [-], 240 | hypothetical protein | |
139 | ATC_RS06195 | 1251531..1252406 [-], 876 | hypothetical protein | |
140 | ATC_RS16380 | 1252633..1253550 [-], 918 | hypothetical protein | |
141 | ATC_RS06205 | 1254571..1255236 [-], 666 | conjugal transfer protein | TraF, T4SS component |
142 | ATC_RS06210 | 1255351..1257096 [-], 1746 | DUF3363 domain-containing protein | Relaxase, MOBL Family |
143 | ATC_RS06215 | 1257069..1257875 [-], 807 | hypothetical protein | |
144 | ATC_RS06220 | 1257868..1258302 [-], 435 | glycerol acyltransferase | |
145 | ATC_RS06225 | 1258316..1259482 [-], 1167 | hypothetical protein | |
146 | ATC_RS06230 | 1259717..1260874 [-], 1158 | DNA (cytosine-5-)-methyltransferase | |
147 | ATC_RS06235 | 1260996..1261211 [-], 216 | hypothetical protein | |
148 | ATC_RS06240 | 1261233..1263824 [-], 2592 | hypothetical protein | |
149 | ATC_RS06245 | 1263829..1265565 [-], 1737 | site-specific DNA-methyltransferase | |
150 | ATC_RS06250 | 1265631..1267274 [-], 1644 | transposase | |
151 | ATC_RS06255 | 1267362..1267682 [-], 321 | addiction module antidote protein, HigA family | |
152 | ATC_RS06260 | 1268229..1268561 [-], 333 | hypothetical protein | |
153 | ATC_RS06265 | 1268697..1268900 [-], 204 | hypothetical protein | |
154 | ATC_RS06270 | 1268978..1271308 [-], 2331 | DNA topoisomerase III | |
155 | ATC_RS06275 | 1271393..1272364 [-], 972 | DNA polymerase I | |
156 | ATC_RS06280 | 1272520..1272783 [-], 264 | hypothetical protein | |
157 | ATC_RS06285 | 1273329..1273532 [-], 204 | hypothetical protein | |
158 | ATC_RS06290 | 1273602..1273793 [-], 192 | hypothetical protein | |
159 | ATC_RS06295 | 1273969..1274289 [-], 321 | hypothetical protein | |
160 | ATC_RS06300 | 1274345..1274701 [-], 357 | hypothetical protein | |
161 | ATC_RS06305 | 1274971..1275357 [+], 387 | hypothetical protein | |
162 | ATC_RS06310 | 1275411..1276616 [-], 1206 | hypothetical protein | |
163 | ATC_RS06315 | 1276627..1277079 [-], 453 | hypothetical protein | |
164 | ATC_RS06320 | 1277142..1277717 [-], 576 | hypothetical protein | |
165 | ATC_RS06325 | 1278605..1278961 [-], 357 | hypothetical protein | |
166 | ATC_RS16385 | 1279023..1279520 [-], 498 | HU family DNA-binding protein | |
167 | ATC_RS06340 | 1279710..1280270 [-], 561 | transglycosylase | VirB1, T4SS component |
168 | ATC_RS06345 | 1280302..1281045 [-], 744 | hypothetical protein | |
169 | ATC_RS06350 | 1281109..1281408 [-], 300 | hypothetical protein | |
170 | ATC_RS06355 | 1281417..1282433 [-], 1017 | hypothetical protein | |
171 | ATC_RS06360 | 1282536..1282808 [-], 273 | hypothetical protein | |
172 | ATC_RS06365 | 1282868..1284016 [-], 1149 | hypothetical protein | |
173 | ATC_RS15985 | 1284089..1285066 [-], 978 | hypothetical protein | |
174 | ATC_RS06375 | 1285436..1285798 [-], 363 | hypothetical protein | |
175 | ATC_RS06380 | 1285809..1286939 [-], 1131 | hypothetical protein | |
176 | ATC_RS06385 | 1286939..1289086 [-], 2148 | DUF2958 domain-containing protein | |
177 | ATC_RS06390 | 1289099..1291888 [-], 2790 | DUF1738 domain-containing protein | |
178 | ATC_RS06395 | 1291952..1292872 [-], 921 | DNA adenine methylase | |
179 | ATC_RS06400 | 1292869..1294092 [-], 1224 | hypothetical protein | |
180 | ATC_RS06405 | 1294122..1294571 [-], 450 | RusA family crossover junction endodeoxyribonuclease | |
181 | ATC_RS06410 | 1294840..1295673 [-], 834 | hypothetical protein | |
182 | ATC_RS15990 | 1295670..1296662 [-], 993 | hypothetical protein | |
183 | ATC_RS06420 | 1296659..1296847 [-], 189 | hypothetical protein | |
184 | ATC_RS06425 | 1296844..1298010 [-], 1167 | hypothetical protein | |
185 | ATC_RS06430 | 1298007..1298795 [-], 789 | hypothetical protein | |
186 | ATC_RS06435 | 1298792..1299079 [-], 288 | transcriptional regulator | |
187 | ATC_RS16390 | 1299327..1299557 [-], 231 | hypothetical protein | |
188 | ATC_RS16395 | 1299638..1300291 [+], 654 | hypothetical protein | |
189 | ATC_RS06445 | 1300402..1300602 [+], 201 | hypothetical protein | |
190 | ATC_RS06450 | 1300854..1301630 [+], 777 | hypothetical protein | |
191 | ATC_RS06455 | 1301703..1302296 [+], 594 | hypothetical protein | |
192 | ATC_RS06460 | 1303147..1304031 [+], 885 | phage recombination protein Bet | |
193 | ATC_RS06465 | 1304035..1305552 [+], 1518 | heme peroxidase | |
194 | ATC_RS16400 | 1305542..1305745 [+], 204 | DUF1289 domain-containing protein | |
195 | ATC_RS16405 | 1305763..1306083 [+], 321 | DNA-binding protein | |
196 | ATC_RS06475 | 1306337..1307980 [+], 1644 | transposase | |
197 | ATC_RS16000 | 1308012..1308785 [+], 774 | site-specific integrase | |
198 | ATC_RS06490 | 1308915..1309358 [-], 444 | transcriptional repressor | |
199 | ATC_RS06495 | 1309529..1311733 [-], 2205 | TonB-dependent receptor | |