ICEberg
I. Information of ICE
ICEberg ID878
Name ICE_SagNEM316_TnGBS1_3 This is a predicted ICE derived from literature
OrganismStreptococcus agalactiae NEM316
Size (bp)47.068 kb
GC content [Genome] (%)-
Insertion siteintergenic
Function-
Species that ICE can be transferred to-
Nucleotide SequenceAL732656 (ICE sequence without defined boundaries)
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICE_SagNEM316_TnGBS1_3 is not available.

 

The gene information of ICE_SagNEM316_TnGBS1_3 is not available.
ElementNo. of sequencesDownload
Nucleotide sequences0Fasta
Proteins0Fasta
(1) Ambroset C; Coluzzi C; Guedon G; Devignes MD; Loux V; Lacroix T; Payot S; Leblond-Bourget N (2015). New Insights into the Classification and Integration Specificity of Streptococcus Integrative Conjugative Elements through Extensive Genome Exploration. Front Microbiol. 1.279861111. [PubMed:26779141] in_silico
(2) Guerillot R; Da Cunha V; Sauvage E; Bouchier C; Glaser P (2013). Modular evolution of TnGBSs, a new family of integrative and conjugative elements associating insertion sequence transposition, plasmid replication, and conjugation for their spreading. J Bacteriol. 195(9):1979-90. [PubMed:23435978] experimental in_silico
(3) Glaser P; Rusniok C; Buchrieser C; Chevalier F; Frangeul L; Msadek T; Zouine M; Couve E; Lalioui L; Poyart C; Trieu-Cuot P; Kunst F (2002). Genome sequence of Streptococcus agalactiae, a pathogen causing invasive neonatal disease. Mol Microbiol. 45(6):1499-513. [PubMed:12354221]
 
experimental experimental literature
in_silico in silico analysis literature

Genomics & Bioinformatics Group in MML, SJTU