 ICEberg ID | 837 |
Name  | ICESsuNC28  |
| ICEO ID | ICEO_0000220 |
| Organism | Streptococcus suis nc286A7 |
| Size (bp) | 29661 |
| GC content [Genome] (%) | 34.14 |
| Insertion site | - |
| Function | spw_like-sat4-lnu(B)-lsa(E) multidrug resistance cluster; cadmium resistance operon |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | KU215704 (complete ICE sequence in this GenBank file) |
| Replicon | - |
| Coordinates | 1..29661 |
| Putative oriT region | - |
| Putative relaxase | - |
The graph information of ICESsuNC28 components from KU215704 | |||||
 | |||||
| Complete gene list of ICESsuNC28 from KU215704 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | ICESsuNC28_00001 | 270..1322 [-], 1053 | hypothetical protein | ||
| 2 | ICESsuNC28_00002 | 1316..2782 [-], 1467 | hypothetical protein | ||
| 3 | ICESsuNC28_00003 | 3144..4547 [-], 1404 | hypothetical protein | ||
| 4 | ICESsuNC28_00004 | 4637..5215 [-], 579 | hypothetical protein | ||
| 5 | ICESsuNC28_00005 | 5224..6195 [-], 972 | hypothetical protein | ||
| 6 | ICESsuNC28_00006 | 6302..10702 [-], 4401 | hypothetical protein | ||
| 7 | ICESsuNC28_00007 | 10706..11437 [-], 732 | hypothetical protein | ||
| 8 | cadC | 12062..12430 [-], 369 | CadC | ||
| 9 | ICESsuNC28_00009 | 12412..13038 [-], 627 | hypothetical protein | ||
| 10 | spw-like | 13872..14660 [-], 789 | Spw-like protein | ||
| 11 | apt | 14792..15319 [-], 528 | Apt | ||
| 12 | aadE | 15363..16226 [-], 864 | AadE | ||
| 13 | ycgJ | 16259..16993 [-], 735 | YcgJ | ||
| 14 | ICESsuNC28_00014 | 16974..17564 [-], 591 | hypothetical protein | ||
| 15 | lnu(B) | 17882..18685 [-], 804 | Lnu(B) | AR | |
| 16 | lsa(E) | 18739..20223 [-], 1485 | Lsa(E) | ||
| 17 | ICESsuNC28_00017 | 20750..20935 [-], 186 | hypothetical protein | ||
| 18 | pknB | 21632..22465 [-], 834 | PknB | ||
| 19 | czcD | 22540..23430 [-], 891 | CzcD | ||
| 20 | bmrR | 23531..24301 [+], 771 | BmrR | ||
| 21 | ICESsuNC28_00021 | 24556..24816 [-], 261 | hypothetical protein | ||
| 22 | ICESsuNC28_00022 | 25453..25809 [-], 357 | hypothetical protein | ||
| 23 | ICESsuNC28_00023 | 25809..26171 [-], 363 | hypothetical protein | ||
| 24 | ICESsuNC28_00024 | 26164..26454 [-], 291 | hypothetical protein | ||
| 25 | ICESsuNC28_00025 | 26469..27293 [-], 825 | hypothetical protein | ||
| 26 | ICESsuNC28_00026 | 27302..27586 [-], 285 | hypothetical protein | ||
| 27 | ICESsuNC28_00027 | 27739..28257 [+], 519 | hypothetical protein | ||
| 28 | Int-Tn | 28305..29474 [+], 1170 | Int-Tn | Integrase | |
 Gene may contribute to site-specific recombination |
| (1) Huang K; Zhang Q; Song Y; Zhang Z; Zhang A; Xiao J; Jin M (2016). Characterization of Spectinomycin Resistance in Streptococcus suis Leads to Two Novel Insights into Drug Resistance Formation and Dissemination Mechanism. Antimicrob Agents Chemother. 60(10):6390-2. [PubMed:27458226] |