I. Information of ICE

ICEberg ID	824
Name	ICESpST344-2
Organism	Streptococcus pneumoniae ST344 NT 110 58
Size (bp)	-
GC content [Genome] (%)	[39.7]
Insertion site	-
Function	-
Species that ICE can be transferred to	-
Nucleotide Sequence	CP007593 (partial ICE sequence)
Putative oriT region	-
Putative relaxase	-

II. ICE interaction with IME/CIME/

The interaction information of ICESpST344-2 is not available.

The graph information of ICESpST344-2 components from CP007593
Incomplete gene list of ICESpST344-2 from CP007593
#	Gene	Coordinates [+/-], size (bp)	Product  (GenBank annotation)	*Reannotation
1	SpnNT_00939	972564..974675 [+], 2112	hypothetical protein
2	iap	974672..975673 [+], 1002	putative endopeptidase p60 precursor
3	SpnNT_00941	975688..976605 [+], 918	Conjugative transposon protein TcpC	Orf13_Tn, T4SS component
4	tetM	976981..978900 [+], 1920	Tetracycline resistance protein TetM from transposon TnFO1	AR
5	SpnNT_00943	979246..979599 [-], 354	anaerobic benzoate catabolism transcriptional regulator
6	SpnNT_00944	980104..980526 [+], 423	RNA polymerase sigma factor
7	SpnNT_00945	980523..980753 [+], 231	Helix-turn-helix domain protein
8	SpnNT_00946	981214..981417 [+], 204	Excisionase from transposon
9	SpnNT_00947	981499..982716 [+], 1218	Integrase	Integrase
10	SpnNT_00948	982986..983576 [+], 591	hypothetical protein
11	SpnNT_00949	983576..984412 [+], 837	hypothetical protein
12	SpnNT_00950	984695..984994 [+], 300	hypothetical protein
13	SpnNT_00951	984984..985472 [+], 489	hypothetical protein
14	SpnNT_00952	985472..987349 [+], 1878	conjugal transfer coupling protein TraG	T4CP
15	SpnNT_00953	987370..987612 [+], 243	hypothetical protein
16	SpnNT_00954	987629..988483 [+], 855	hypothetical protein
17	SpnNT_00955	988537..988896 [+], 360	PrgI family protein
18	SpnNT_00956	988847..989629 [+], 783	Type IV secretory pathway, VirB4 components
19	SpnNT_00957	989636..991204 [+], 1569	type-IV secretion system protein TraC

Flanking regions

(1) Hilty M; Wuthrich D; Salter SJ; Engel H; Campbell S; Sa-Leao R; de Lencastre H; Hermans P; Sadowy E; Turner P; Chewapreecha C; Diggle M; Pluschke G; McGee L; Koseoglu Eser O; Low DE; Smith-Vaughan H; Endimiani A; Kuffer M; Dupasquier M; Beaudoing E; Weber J; Bruggmann R; Hanage WP; Parkhill J; Hathaway LJ; Muhlemann K; Bentley SD (2014). Global phylogenomic analysis of nonencapsulated Streptococcus pneumoniae reveals a deep-branching classic lineage that is distinct from multiple sporadic lineages. Genome Biol Evol. 6(12):3281-94. [PubMed:25480686]

in silico analysis literature