ICEberg ID | 809 |
Name | ICESIB196-2 |
Organism | Streptococcus intermedius B196 |
Size (bp) | - |
GC content [Genome] (%) | - |
Insertion site | - |
Function | - |
Species that ICE can be transferred to | - |
Nucleotide Sequence | CP003857 (partial ICE sequence) |
Putative oriT region | - |
Putative relaxase | - |
The graph information of ICESIB196-2 components from CP003857 | |||||
Incomplete gene list of ICESIB196-2 from CP003857 | |||||
# | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
1 | SIR_1314 | 1376845..1377960 [-], 1116 | hypothetical protein | ||
2 | SIR_1315 | 1377966..1378670 [-], 705 | putative ABC transporter ATP-binding protein | ||
3 | SIR_1316 | 1378673..1378825 [-], 153 | hypothetical protein | ||
4 | SIR_1317 | 1378852..1380189 [-], 1338 | putative biosynthesis protein | ||
5 | SIR_1318 | 1380291..1380467 [-], 177 | putative subtilosin A | ||
6 | SIR_1319 | 1380671..1381183 [+], 513 | putative conjugative transposon | ||
7 | SIR_1320 | 1381189..1382520 [+], 1332 | hypothetical protein | ||
8 | SIR_1321 | 1382588..1383259 [-], 672 | hypothetical protein |
Flanking regions |
(1) Olson AB; Kent H; Sibley CD; Grinwis ME; Mabon P; Ouellette C; Tyson S; Graham M; Tyler SD; Van Domselaar G; Surette MG; Corbett CR (2013). Phylogenetic relationship and virulence inference of Streptococcus Anginosus Group: curated annotation and whole-genome comparative analysis support distinct species designation. BMC Genomics. 1.204861111. [PubMed:24341328] |
in silico analysis literature |