 ICEberg ID | 807 |
Name  | ICESGB76  |
| Organism | Streptococcus agalactiae SGB76 |
| Size (bp) | 12,076 |
| GC content [Genome] (%) | 30.47 |
| Insertion site | - |
| Function | Antibiotic resistance genes: sat4, ant9 |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | KF772204 (complete ICE sequence in this GenBank file) |
| Replicon | - |
| Coordinates | 1..12076 |
| Putative oriT region | - |
| Putative relaxase | - |
The graph information of ICESGB76 components from CP003857 | |||||
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| Complete gene list of ICESGB76 from CP003857 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | dnaA | 225..1568 [+], 1344 | chromosomal replication initiator protein DnaA | ||
| 2 | dnaN | 1724..2860 [+], 1137 | DNA polymerase III subunit beta | ||
| 3 | SIR_0003 | 2860..3057 [+], 198 | hypothetical protein | ||
| 4 | SIR_0004 | 3080..3580 [-], 501 | hypothetical protein | ||
| 5 | ychF | 3726..4841 [+], 1116 | translation-associated GTPase | ||
| 6 | pth | 4913..5482 [+], 570 | peptidyl-tRNA hydrolase | ||
| 7 | trcF | 5475..8981 [+], 3507 | transcription-repair coupling factor | ||
| 8 | SIR_0008 | 9061..9327 [+], 267 | hypothetical protein | ||
| 9 | SIR_0009 | 9320..9688 [+], 369 | hypothetical protein | ||
| 10 | SIR_0010 | 9691..9819 [+], 129 | hypothetical protein | ||
| 11 | SIR_0011 | 9812..11092 [+], 1281 | beta-lactamase class A | ||
| 12 | tilS | 11089..12366 [+], 1278 | tRNA(Ile)-lysidine synthetase | ||
| 13 | hpt | 12372..12914 [+], 543 | hypoxanthine-guanine phosphoribosyltransferase | ||
| 14 | ftsH | 12935..14905 [+], 1971 | cell division protein, putative | ||
 Flanking regions |
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(1) Campisi E; Rosini R; Ji W; Guidotti S; Rojas-Lopez M; Geng G; Deng Q; Zhong H; Wang W; Liu H; Nan C; Margarit I; Rinaudo CD (2016). Genomic Analysis Reveals Multi-Drug Resistance Clusters in Group B Streptococcus CC17 Hypervirulent Isolates Causing Neonatal Invasive Disease in Southern Mainland China. Front Microbiol. 1.170138889. [PubMed:27574519]
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(2) Montilla A; Zavala A; Caceres Caceres R; Cittadini R; Vay C; Gutkind G; Famiglietti A; Bonofiglio L; Mollerach M (2014). Genetic environment of the lnu(B) gene in a Streptococcus agalactiae clinical isolate. Antimicrob Agents Chemother. 58(9):5636-7. [PubMed:24957835]
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| in silico analysis literature |