ICEberg
I. Information of ICE
ICEberg ID771
Name ICEEfm1 This is a predicted ICE derived from literature
OrganismEnterococcus faecium
Size (bp)64-104 kb
GC content [Genome] (%)-
Insertion siteSingle site, Identified downstream rpsI gene
Function-
Species that ICE can be transferred to-
Nucleotide Sequence-
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICEEfm1 is not available.

 

The gene information of ICEEfm1 is not available.
ElementNo. of sequencesDownload
Nucleotide sequences0Fasta
Proteins0Fasta
(1) Top J; Sinnige JC; Majoor EA; Bonten MJ; Willems RJ; van Schaik W (2011). The recombinase IntA is required for excision of esp-containing ICEEfm1 in Enterococcus faecium. J Bacteriol. 193(4):1003-6. [PubMed:21148730]
(2) van Schaik W; Top J; Riley DR; Boekhorst J; Vrijenhoek JE; Schapendonk CM; Hendrickx AP; Nijman IJ; Bonten MJ; Tettelin H; Willems RJ (2010). Pyrosequencing-based comparative genome analysis of the nosocomial pathogen Enterococcus faecium and identification of a large transferable pathogenicity island. BMC Genomics. 0.624305556. [PubMed:20398277]
(3) Leavis H; Top J; Shankar N; Borgen K; Bonten M; van Embden J; Willems RJ (2004). A novel putative enterococcal pathogenicity island linked to the esp virulence gene of Enterococcus faecium and associated with epidemicity. J Bacteriol. 186(3):672-82. [PubMed:14729692]
 

Genomics & Bioinformatics Group in MML, SJTU