 ICEberg ID | 75 |
Name  | ICEMlSym(R7A)  |
| ICEO ID | ICEO_0000703 |
| Organism | Mesorhizobium loti R7A |
| Size (bp) | 501801 |
| GC content [Genome] (%) | 59.3 |
| Insertion site | tRNA-Phe |
| Function | Nitrogen-fixing symbiosis |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | AL672115; AL672114; AL672113; AL672112 (partial ICE sequence) |
| Putative oriT region | - |
| Putative relaxase | coordinates: 131520..133490; Locus tag: -; Family: MOBL |
The graph information of ICEMlSym(R7A) components from AL672114 | |||||
 | |||||
| Incomplete gene list of ICEMlSym(R7A) from AL672114 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | msi239 | 520..786 [+], 267 | PUTATIVE TRANSPOSASE FOR INSERTION ELEMENT PROTEIN | ||
| 2 | msi240 (intS) | 780..1709 [+], 930 | PUTATIVE TRANSPOSASE FOR INSERTION SEQUENCE | Integrase | |
| 3 | msi241 | 1825..2691 [-], 867 | PUTATIVE AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN | ||
| 4 | msi242 | 2688..3569 [-], 882 | PUTATIVE AMINO-ACID ABC TRANSPORTER PERMEASE PROTEIN | ||
| 5 | msi243 | 3724..4557 [-], 834 | PUTATIVE AMINO ACID ABC TRANSPORTER PERIPLASMIC BINDING PROTEIN | ||
| 6 | msi244 | 4612..4797 [-], 186 | HYPOTHETICAL PROTEIN | ||
| 7 | msi245 | 5155..6489 [+], 1335 | PUTATIVE TRANSPOSASE FOR INSERTION ELEMENT PROTEIN | ||
| 8 | kbl | 7356..8585 [-], 1230 | HYPOTHETICAL 2-AMINO-3-KETOBUTYRATE COENZYME A LIGASE 2.3.1.29 PROTEIN | ||
| 9 | msi247 | 8655..9614 [-], 960 | PUTATIVE BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE PROTEIN | ||
| 10 | msi248 | 9937..10392 [-], 456 | PUTATIVE TRANSCRIPTION REGULATOR PROTEIN | ||
| 11 | msi249 | 11141..12298 [-], 1158 | PUTATIVE HYDROLASE/PEPTIDASE PROTEIN | ||
| 12 | msi250 | 13031..14431 [-], 1401 | CONSERVED HYPOTHETICAL PROTEIN | ||
| 13 | msi251 | 14633..15343 [-], 711 | PUTATIVE AMIDOTRANSFERASE PROTEIN | ||
| 14 | msi252 | 15365..16525 [-], 1161 | PUTATIVE HYDROLASE/PEPTIDASE PROTEIN | ||
| 15 | soxG2 | 18515..19069 [-], 555 | PUTATIVE SARCOSINE OXIDASE GAMMA SUBUNIT PROTEIN | ||
| 16 | soxA2 | 19062..21995 [-], 2934 | PUTATIVE SARCOSINE OXIDASE ALPHA SUBUNIT PROTEIN | ||
| 17 | soxD2 | 21992..22327 [-], 336 | PUTATIVE SARCOSINE OXIDASE DELTA SUBUNIT PROTEIN | ||
| 18 | soxB2 | 22290..23540 [-], 1251 | PROBABLE SARCOSINE OXIDASE BETA SUBUNIT PROTEIN | ||
| 19 | msi257 | 23605..23799 [+], 195 | HYPOTHETICAL PROTEIN | ||
| 20 | msi258 | 24635..25672 [+], 1038 | PUTATIVE TRANSPOSASE FOR INSERTION SEQUENCE | ||
| 21 | msi259 | 26149..26991 [-], 843 | HYPOTHETICAL PROTEIN | ||
| 22 | msi260 | 26981..28240 [-], 1260 | PUTATIVE DIAMINOBUTYRATE--PYRUVATE AMINOTRANSFERASE PROTEIN | ||
| 23 | msi261 | 28857..29090 [+], 234 | HYPOTHETICAL PROTEIN | ||
| 24 | msi262 | 29259..29579 [+], 321 | HYPOTHETICAL CONSERVED PROTEIN | ||
| 25 | msi263 | 29606..30067 [+], 462 | HYPOTHETICAL PROTEIN | ||
| 26 | msi264 | 30304..30939 [+], 636 | HYPOTHETICAL CONSERVED PROTEIN | ||
| 27 | msi265 | 30936..31289 [+], 354 | PUTATIVE 6-PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE PROTEIN | ||
| 28 | msi266 | 31294..32031 [+], 738 | CONSERVED HYPOTHETICAL PROTEIN | ||
| 29 | msi267 | 32517..33557 [+], 1041 | PUTATIVE TRANSCRIPTION REGULATOR LACI-FAMILY PROTEIN | ||
| 30 | msi268 | 33596..33760 [+], 165 | HYPOTHETICAL PROTEIN | ||
| 31 | msi269 | 33861..34058 [-], 198 | HYPOTHETICAL PROTEIN | ||
| 32 | msi270 | 34249..34437 [-], 189 | HYPOTHETICAL PROTEIN | ||
| 33 | msi271 | 34563..35024 [+], 462 | HYPOTHETICAL PROTEIN | ||
| 34 | msi272 | 35058..35435 [-], 378 | HYPOTHETICAL PROTEIN | ||
| 35 | accD | 35894..36907 [-], 1014 | PROBABLE 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE PROTEIN | ||
| 36 | msi274 | 38200..38520 [-], 321 | HYPOTHETICAL CONSERVED PROTEIN | ||
| 37 | msi275 | 38558..38875 [-], 318 | PROBABLE FERREDOXIN III FDIII PROTEIN | ||
| 38 | msi276 | 38872..39075 [-], 204 | HYPOTHETICAL CONSERVED PROTEIN | ||
| 39 | msi277 | 40114..40317 [+], 204 | HYPOTHETICAL PROTEIN | ||
| 40 | msi278 | 40635..42689 [-], 2055 | HYPOTHETICAL, FUSION OF HYPOTHETICAL PROTEIN & ONE WITH PARTIAL SIMILARITY TO MET-TRNA SYNTHETASES | ||
| 41 | msi279 | 42963..43742 [-], 780 | PUTATIVE SIMILARITY TO EPOXIDASE SUBUNIT A PROTEIN | ||
| 42 | msi280 | 44504..45994 [-], 1491 | PUTATIVE AMINO-ACID MONOOXYGENASE PROTEIN | ||
| 43 | msi281 | 48291..48503 [+], 213 | HYPOTHETICAL PROTEIN | ||
| 44 | adc | 49239..49982 [+], 744 | PROBABLE ACETOACETATE DECARBOXYLASE PROTEIN | ||
| 45 | msi283 | 50007..50408 [+], 402 | HYPOTHETICAL PROTEIN | ||
| 46 | msi284 | 50534..50869 [+], 336 | HYPOTHETICAL PROTEIN | ||
| 47 | msi285 | 51127..51741 [-], 615 | PUTATIVE OXIDOREDUCTASE PROTEIN | ||
| 48 | msi286 | 51927..52814 [-], 888 | CONSERVED HYPOTHETICAL PROTEIN | ||
| 49 | msi287 | 52913..53617 [-], 705 | PUTATIVE TWO-COMPONENT RESPONSE REGULATOR PROTEIN | ||
| 50 | msi288 | 53723..54202 [-], 480 | HYPOTHETICAL CONSERVED PROTEIN | ||
| 51 | nifX | 54220..54717 [-], 498 | PROBABLE NIFX NITROGEN FIXATION PROTEIN | ||
| 52 | nifN | 54683..56065 [-], 1383 | PROBABLE NITROGENASE IRON-MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN NIFN | ||
| 53 | nifE | 56075..57565 [-], 1491 | PROBABLE NITROGENASE IRON-MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN NIFE | ||
| 54 | nifK | 57626..59167 [-], 1542 | PROBABLE NITROGENASE MOLYBDENUM-IRON PROTEIN BETA CHAIN NIFK | ||
| 55 | nifD | 59295..60800 [-], 1506 | PROBABLE NITROGENASE MOLYBDENUM-IRON PROTEIN ALPHA CHAIN NIFD | ||
| 56 | nifH | 60905..61798 [-], 894 | PROBABLE NITROGENASE IRON PROTEIN NIFH | ||
| 57 | msi295 | 62377..62595 [-], 219 | HYPOTHETICAL PROTEIN | ||
| 58 | msi296 | 62818..63123 [+], 306 | HYPOTHETICAL PROTEIN | ||
| 59 | msi297 | 63144..63674 [+], 531 | HYPOTHETICAL TRANSMEMBRANE PROTEIN | ||
| 60 | msi298 | 64573..64761 [+], 189 | HYPOTHETICAL PROTEIN | ||
| 61 | msi299 | 64797..65243 [+], 447 | PUTATIVE TRANSPOSASE NUMBER 1 FOR INSERTION SEQUENCE | ||
| 62 | msi300 | 65240..65596 [+], 357 | PUTATIVE TRANSPOSASE NUMBER 2 FOR INSERTION SEQUENCE | ||
| 63 | msi301 | 65655..67184 [+], 1530 | PUTATIVE TRANSPOSASE NUMBER 3 FOR INSERTION SEQUENCE | ||
| 64 | msi302 | 67382..68266 [-], 885 | PUTATIVE DNA METHYLTRANSFERASE PROTEIN | ||
| 65 | msi303 | 68334..69677 [-], 1344 | HYPOTHETICAL PROTEIN | ||
| 66 | msi304 | 69943..70152 [+], 210 | HYPOTHETICAL PROTEIN | ||
| 67 | phnL | 70360..71079 [-], 720 | PUTATIVE PHOSPHONATE TRANSPORT ATP-BINDING PROTEIN PHNL | ||
| 68 | phnM | 71109..72314 [-], 1206 | PUTATIVE PHOSPHONATE METABOLISM PROTEIN PHNM | ||
| 69 | phnK | 72315..73112 [-], 798 | PUTATIVE PHOSPHONATE TRANSPORT ATP-BINDING PROTEIN PHNK | ||
| 70 | phnJ | 73109..74059 [-], 951 | PUTATIVE C-P LYASE SUBUNIT PHNJ PROTEIN PHOSPHONATE METABOLISM | ||
| 71 | phnI | 74056..75162 [-], 1107 | PUTATIVE C-P LYASE SUBUNIT PHNJ PROTEIN PHOSPHONATE METABOLISM | ||
| 72 | phnH | 75163..75768 [-], 606 | PUTATIVE C-P LYASE SUBUNIT PHNJ PROTEIN PHOSPHONATE METABOLISM | ||
| 73 | phnG | 75765..76220 [-], 456 | PUTATIVE C-P LYASE SUBUNIT PHNJ PROTEIN PHOSPHONATE METABOLISM | ||
| 74 | phnF | 76458..77159 [-], 702 | PUTATIVE TRANSCRIPTIONAL REGULATOR PHNF PROTEIN | ||
| 75 | msi313 | 77228..78457 [-], 1230 | HYPOTHETICAL PROTEIN | ||
| 76 | msi314 | 78483..79511 [-], 1029 | PUTATIVE ABC TRANSPORTER OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN | ||
| 77 | msi315 | 79508..80524 [-], 1017 | PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEIN OLIGOPEPTIDE TRANSPORT | ||
| 78 | msi316 | 80560..82074 [-], 1515 | PUTATIVE ABC TRANSPORTER PEPTIDE-BINDING PERIPLASMIC PROTEIN | ||
| 79 | msi317 | 82145..83053 [-], 909 | PUTATIVE ABC TRANSPORTER PERMEASE PROTEIN OLIGOPEPTIDE | ||
| 80 | msi318 | 83050..83961 [-], 912 | PUTATIVE ABC TRANSPORTER PERMEASE PROTEIN OLIGOPEPTIDE | ||
| 81 | msi319 | 84675..85376 [-], 702 | PUTATIVE TRANSCRIPTIONAL REGULATOR PROTEIN | ||
| 82 | msi320 | 85480..85770 [-], 291 | HYPOTHETICAL PROTEIN | ||
| 83 | msi321 | 85776..86654 [-], 879 | HYPOTHETICAL-CONTAINS METHYLTRANSFERASE DOMAIN PROTEIN | ||
| 84 | msi322 | 87717..89426 [-], 1710 | PUTATIVE AMINOTRANSFERASE PROTEIN | ||
| 85 | asnB | 89570..91462 [-], 1893 | PROBABLE ASPARAGINE SYNTHETASE PROTEIN | ||
| 86 | msi324 | 92422..93024 [-], 603 | HYPOTHETICAL PROTEIN | ||
| 87 | msi325 | 93021..93839 [-], 819 | HYPOTHETICAL CONSERVED PROTEIN | ||
| 88 | aatA | 93870..95060 [-], 1191 | PUTATIVE ASPARTATE AMINOTRANSFERASE PROTEIN | ||
| 89 | pepM | 95108..96016 [-], 909 | PUTATIVE PHOSPHOENOLPYRUVATE PHOSPHOMUTASE PROTEIN | ||
| 90 | msi328 | 96525..97568 [-], 1044 | PUTATIVE MONOOXYGENASE OXIDOREDUCTASE PROTEIN | ||
| 91 | msi329 | 97819..99459 [-], 1641 | PUTATIVE SHORT-CHAIN TYPE DEHYDROGENASE/REDUCTASE PROTEIN | ||
| 92 | msi330 | 99643..100182 [-], 540 | HYPOTHETICAL CONSERVED PROTEIN | ||
| 93 | msi331 | 100394..100639 [-], 246 | PUTATIVE FERREDOXIN PROTEIN | ||
| 94 | msi332 | 100678..101895 [-], 1218 | PUTATIVE MONOOXYGENASE CYTOCHROME P450 PROTEIN | ||
| 95 | msi333 | 102577..102735 [+], 159 | HYPOTHETICAL PROTEIN | ||
| 96 | msi334 | 103380..103928 [+], 549 | CONSERVED HYPOTHETICAL-PEROXIREDOXIN 2 FAMILY PROTEIN | ||
| 97 | rpoN2 | 104003..105457 [+], 1455 | PUTATIVE RNA POLYMERASE SIGMA-54 FACTOR PROTEIN | ||
| 98 | nifQ | 105454..106107 [-], 654 | PROBABLE NITROGEN FIXATION PROTEIN NIFQ | ||
| 99 | fdxB | 106104..106421 [-], 318 | PROBABLE FDXB FERREDOXIN III PROTEIN | ||
| 100 | msi338 | 106418..106621 [-], 204 | HYPOTHETICAL CONSERVED PROTEIN | ||
| 101 | exsA | 107253..109184 [-], 1932 | PROBABLE SACCHARIDE EXPORTING ABC TRANSPORTER PROTEIN, ATP-BINDING AND PERMEASE DOMAINS | ||
| 102 | nifS | 109876..111132 [+], 1257 | PROBABLE PYRIDOXAL-PHOSPHATE-DEPENDENT AMINOTRANSFERASE NITROGEN FIXATION NIFS PROTEIN | ||
| 103 | nifW | 111113..111496 [+], 384 | PROBABLE NITROGEN FIXATION PROTEIN NIFW | ||
| 104 | fixA | 111679..112530 [+], 852 | PUTATIVE ELECTRON TRANSFER FLAVOPROTEIN SUBUNIT NITROGEN FIXATION FIXA | ||
| 105 | fixB | 112548..113657 [+], 1110 | PROBABLE ELECTRON TRANSFER FLAVOPROTEIN SUBUNIT NITROGEN FIXATION FIXB | ||
| 106 | fixC | 113670..114977 [+], 1308 | PROBABLE ELECTRON TRANSFER FLAVOPROTEIN-QUINONE OXIDOREDUCTASE FIXC | ||
| 107 | fixX | 114990..115289 [+], 300 | PROBABLE FERREDOXIN-LIKE PROTEIN NITROGEN FIXATION FIXX | ||
| 108 | nifA1 | 115446..117206 [+], 1761 | PROBABLE NIF-SPECIFIC REGULATORY PROTEIN ACTIVATOR ATP-BINDING, DNA-BINDING NIFA | ||
| 109 | nifB | 117457..118938 [+], 1482 | PROBABLE NITROGEN FIXATION PROTEIN NIFB | ||
| 110 | fdxN | 118971..119165 [+], 195 | PROBABLE FERREDOXIN-LIKE PROTEIN IN NIF REGION FDXN | ||
| 111 | nifZ | 119256..119582 [+], 327 | PUTATIVE NITROGEN FIXATION PROTEIN NIFZ | ||
| 112 | fixU | 119579..119791 [+], 213 | PROBABLE NITROGEN FIXATION PROTEIN FIXU | ||
| 113 | msi351 | 119842..120744 [+], 903 | HYPOTHETICAL CONSERVED PROTEIN | ||
| 114 | msi352 | 121078..121404 [-], 327 | HYPOTHETICAL PROTEIN | ||
| 115 | nolK | 121802..122770 [-], 969 | PROBABLE GDP-L-FUCOSE SYNTHETASE (NODULATION PROTEIN NOLK) | ||
| 116 | noeL | 122843..123943 [-], 1101 | PUTATIVE GDP-MANNOSE 4,6-DEHYDRATASE NODULATION PROTEIN NOEL | VF | |
| 117 | nodZ | 124086..125075 [-], 990 | PROBABLE FUCOSYLTRANSFERASE (NODULATION PROTEIN NODZ) | ||
| 118 | msi356 | 126006..127211 [-], 1206 | PUTATIVE OXIDOREDUCTASE PROTEIN | ||
| 119 | dctD | 128603..129970 [-], 1368 | PROBABLE C4-DICARBOXYLATE TRANSPORT TRANSCRIPTIONAL REGULATORY PROTEIN DCTD | ||
| 120 | dctB | 129967..131820 [-], 1854 | PROBABLE C4-DICARBOXYLATE TRANSPORT SENSOR PROTEIN DCTB | ||
| 121 | dctA | 132095..133528 [+], 1434 | PROBABLE C4-DICARBOXYLATE TRANSPORT PROTEIN TRANSPORT TRANSMEMBRANE INNER MEMBRANE SYMPORT | ||
| 122 | msi360 | 133820..134875 [+], 1056 | PUTATIVE TRANSCRIPTIONAL REGULATOR LACI FAMILY PROTEIN | ||
| 123 | nifA2 | 135434..137245 [+], 1812 | PROBABLE NIF-SPECIFIC REGULATORY PROTEIN ACTIVATOR ATP-BINDING, DNA-BINDING NIFA | ||
| 124 | msi362 | 137819..138778 [+], 960 | CONSERVED HYPOTHETICAL PROTEIN | ||
| 125 | nadA | 138843..139817 [+], 975 | PROBABLE QUINOLINATE SYNTHETASE A PROTEIN | ||
| 126 | nadB | 139814..141355 [+], 1542 | PROBABLE L-ASPARTATE OXIDASE PROTEIN | ||
| 127 | nadC | 141357..142238 [+], 882 | PROBABLE NICOTINATE-NUCLEOTIDE PYROPHOSPHORYLASE PROTEIN | ||
| 128 | msi366 | 142249..142596 [+], 348 | HYPOTHETICAL PROTEIN | ||
| 129 | bioB | 142743..143738 [+], 996 | BIOTIN SYNTHASE PROTEIN | ||
| 130 | bioF | 143735..144874 [+], 1140 | 7-KETO-8-AMINO-PELARGONIC ACID SYNTHETASE PROTEIN | ||
| 131 | bioD | 144871..145506 [+], 636 | DETHIOBIOTIN SYNTHETASE PROTEIN | ||
| 132 | bioA | 145506..146771 [+], 1266 | 7,8-DIAMINO-PELARGONIC ACID AMINOTRANSFERASE PROTEIN | ||
| 133 | bioZ | 146768..147751 [+], 984 | BIOTIN PRECURSOR PIMELOYL-COA SYNTHESIS PROTEIN | ||
| 134 | panD | 147810..148262 [+], 453 | PUTATIVE ASPARTATE 1-DECARBOXYLASE PROTEIN | ||
| 135 | msi373 | 148698..148901 [-], 204 | HYPOTHETICAL PROTEIN | ||
The graph information of ICEMlSym(R7A) components from AL672113 | |||||
 | |||||
| Incomplete gene list of ICEMlSym(R7A) from AL672113 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | nolO | 104..2125 [-], 2022 | PROBABLE TRANSFERASE, NODULATION PROTEIN NOLO | ||
| 2 | nodJ | 2430..3218 [-], 789 | PROBABLE NODJ MEMBRANE TRANSPORT PROTEIN | ||
| 3 | nodI | 3222..4289 [-], 1068 | PROBABLE NODI MEMBRANE TRANSPORT PROTEIN | ||
| 4 | nodC | 4294..5568 [-], 1275 | PROBABLE NODULATION PROTEIN C, N-ACETYLGLUCOSAMINYLTRANSFERASE | ||
| 5 | nodA | 5624..6220 [-], 597 | PROBABLE NODA N-ACYLTRANSFERASE PROTEIN | ||
| 6 | msi130 | 6579..6833 [+], 255 | HYPOTHETICAL PROTEIN | ||
| 7 | nodS | 7450..8058 [-], 609 | PROBABLE NODULATION PROTEIN S, METHYLTRANSFERASE | ||
| 8 | msi132 | 8659..9840 [-], 1182 | PUTATIVE OXIDOREDUCTASE PROTEIN | ||
| 9 | msi133 | 10113..10421 [-], 309 | HYPOTHETICAL PROTEIN | ||
| 10 | msi134 | 10468..10620 [-], 153 | HYPOTHETICAL PROTEIN | ||
| 11 | msi135 | 11797..14943 [-], 3147 | PUTATIVE DNA METHYLASE PROTEIN | ||
| 12 | msi136 | 15301..16326 [-], 1026 | HYPOTHETICAL PROTEIN | ||
| 13 | msi137 | 16314..17576 [-], 1263 | HYPOTHETICAL TRANSMEMBRANE PROTEIN | ||
| 14 | msi138 | 17580..18413 [-], 834 | HYPOTHETICAL PROTEIN | ||
| 15 | msi139 | 18400..19893 [-], 1494 | HYPOTHETICAL TRANSMEMBRANE PROTEIN | ||
| 16 | msi140 | 20308..21081 [+], 774 | HYPOTHETICAL PROTEIN | ||
| 17 | msi141 | 21365..22096 [-], 732 | HYPOTHETICAL PROTEIN | ||
| 18 | msi142 | 22139..23812 [-], 1674 | HYPOTHETICAL PROTEIN | ||
| 19 | msi143 | 24230..26314 [+], 2085 | CONSERVED HYPOTHETICAL PROTEIN | ||
| 20 | msi144 | 26543..27079 [+], 537 | HYPOTHETICAL PROTEIN | ||
| 21 | msi145 | 27076..27831 [-], 756 | HYPOTHETICAL PROTEIN | ||
| 22 | msi146 | 27901..28875 [-], 975 | HYPOTHETICAL PROTEIN | ||
| 23 | msi147 | 28847..29545 [-], 699 | HYPOTHETICAL PROTEIN | ||
| 24 | msi148 | 29542..30120 [-], 579 | HYPOTHETICAL PROTEIN | ||
| 25 | msi149 | 30597..31571 [-], 975 | HYPOTHETICAL PROTEIN | ||
| 26 | msi150 | 31815..33545 [-], 1731 | HYPOTHETICAL PROTEIN | ||
| 27 | msi151 | 33623..34042 [-], 420 | HYPOTHETICAL PROTEIN | ||
| 28 | ardC | 34246..35208 [-], 963 | PROBABLE ANTIRESTRICTION PROTEIN ARDC | ||
| 29 | msi153 | 35633..36601 [-], 969 | PROBABLE OUTER MEMBRANE SERINE PROTEASE PROTEIN | ||
| 30 | msi154 | 36939..37394 [-], 456 | HYPOTHETICAL PROTEIN | ||
| 31 | msi155 | 37586..37744 [-], 159 | HYPOTHETICAL PROTEIN | ||
| 32 | ltaM | 37784..38899 [-], 1116 | PUTATIVE LOW SPECIFICITY L-THREONINE ALDOLASE PROTEIN | ||
| 33 | msi157 | 38947..39822 [-], 876 | PUTATIVE TRANSCRIPTIONAL REGULATOR ARAC FAMILY PROTEIN | ||
| 34 | msi158 | 40586..41278 [+], 693 | PUTATIVE OUTER MEMBRANE PROTEIN | ||
| 35 | msi159 | 41375..42607 [+], 1233 | PUTATIVE MONOOXYGENASE CYTOCHROME P450 PROTEIN | ||
| 36 | metE | 43379..45787 [+], 2409 | PUTATIVE 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE METHYLTRANSFERASE, METHIONINE SYNTHASE, VITAMIN-B12 INDEPENDENT ISOZYME PROTEIN | ||
| 37 | msi161 | 46274..46639 [+], 366 | HYPOTHETICAL PROTEIN | ||
| 38 | msi162 | 46808..47014 [-], 207 | HYPOTHETICAL PROTEIN | ||
| 39 | msi163 | 47571..48035 [+], 465 | PUTATIVE TRANSCRIPTIONAL REGULATOR PROTEIN | ||
| 40 | csp2 | 48292..48894 [-], 603 | PUTATIVE TRANSCRIPTION REGULATOR COLD SHOCK PROTEIN | ||
| 41 | msi165 | 49264..50256 [-], 993 | PUTATIVE SUGAR KINASE PROTEIN | ||
| 42 | metK | 50357..51532 [-], 1176 | PROBABLE S-ADENOSYLMETHIONINE SYNTHETASE PROTEIN | ||
| 43 | glyA | 51590..52927 [-], 1338 | PROBABLE SERINE HYDROXYMETHYLTRANSFERASE PROTEIN | ||
| 44 | msi168 | 52924..53310 [-], 387 | HYPOTHETICAL PROTEIN | ||
| 45 | msi169 (qseC) | 54711..54923 [-], 213 | PUTATIVE TRANSCRIPTIONAL REGULATOR PROTEIN | QseC; transcriptional regulator; [PMID: 23106190] | |
| 46 | msi170 (qseM) | 55049..55300 [+], 252 | HYPOTHETICAL PROTEIN | QseM; allosteric inhibitor; [PMID: 23106190] | |
| 47 | msi171 | 55330..55872 [-], 543 | HYPOTHETICAL PROTEIN | ||
| 48 | msi172 | 55880..56131 [-], 252 | HYPOTHETICAL PROTEIN | ||
| 49 | msi173 | 56133..56765 [-], 633 | PROBABLE AUTOINDUCER SYNTHESIS PROTEIN | ||
| 50 | msi174 | 56866..57591 [-], 726 | PROBABLE TRANSCRIPTIONAL REGULATOR PROTEIN | ||
| 51 | msi175 | 58264..59670 [-], 1407 | PROBABLE AMINOTRANSFERASE PROTEIN | ||
| 52 | msi176 | 59829..60326 [-], 498 | PROBABLE TRANSCRIPTIONAL REGULATOR ASNC (LRP)-FAMILY PROTEIN | ||
| 53 | fumA | 60394..61938 [-], 1545 | PROBABLE FUMARATE HYDRATASE CLASS I FUMARASE PROTEIN | ||
| 54 | msi178 | 61945..63378 [-], 1434 | PROBABLE ALDEHYDE DEHYDROGENASE PROTEIN | ||
| 55 | msi179 | 63576..64505 [-], 930 | PROBABLE TRANSCRIPTION REGULATOR LYSR FAMILY PROTEIN | ||
| 56 | msi180 | 64675..65589 [-], 915 | PROBABLE SIMILAR TO BETA SUBUNIT OF CITRATE LYASE PROTEIN | ||
| 57 | msi181 | 65711..66880 [-], 1170 | PUTATIVE RACEMASE/DEHYDRATASE PROTEIN | ||
| 58 | maaL | 66877..68148 [-], 1272 | PUTATIVE METHYLASPARTATE AMMONIA-LYASE PROTEIN | ||
| 59 | msi183 | 68174..69178 [-], 1005 | HYPOTHETICAL CONSERVED PROTEIN | ||
| 60 | msi184 | 69903..71633 [+], 1731 | PROBABLE TRANSMEMBRANE TRANSPORT PROTEIN | ||
| 61 | msi185 | 72175..72384 [-], 210 | HYPOTHETICAL PROTEIN | ||
| 62 | msi186 | 72573..74003 [-], 1431 | PUTATIVE AMIDASE PROTEIN | ||
| 63 | msi187 | 74352..74669 [-], 318 | HYPOTHETICAL PROTEIN | ||
| 64 | omp2b | 75203..76312 [-], 1110 | PROBABLE PORIN, OUTER MEMBRANE PROTEIN | ||
| 65 | msi189 | 76695..77336 [-], 642 | HYPOTHETICAL CONSERVED PROTEIN | ||
| 66 | msi190 | 77664..79067 [-], 1404 | HYPOTHETICAL CONSERVED PROTEIN | ||
| 67 | msi191 | 79161..80192 [-], 1032 | PROBABLE ABC TRANSPORTER ATP BINDING ABC TRANSPORTER PROTEIN | ||
| 68 | msi192 | 80189..81196 [-], 1008 | PROBABLE PEPTIDE ABC TRANSPORTER ATP-BINDING ABC TRANSPORTER PROTEIN | ||
| 69 | msi193 | 81198..82073 [-], 876 | PROBABLE PEPTIDE ABC TRANSPORTER PERMEASE ABC TRANSPORTER PROTEIN | ||
| 70 | msi194 | 82075..83016 [-], 942 | PUTATIVE OLIGOPEPTIDE ABC TRANSPORTER PERMEASE ABC TRANSPORTER PROTEIN | ||
| 71 | msi195 | 83023..84615 [-], 1593 | PROBABLE PEPTIDE ABC TRANSPORTER PERIPLASMIC BINDING ABC TRANSPORTER PROTEIN | ||
| 72 | msi196 | 85082..85294 [-], 213 | HYPOTHETICAL PROTEIN | ||
| 73 | msi197 | 85836..87071 [+], 1236 | PUTATIVE LIGASE/CARBOXYLASE PROTEIN | ||
| 74 | msi198 | 87302..87718 [+], 417 | HYPOTHETICAL PROTEIN | ||
| 75 | msi199 | 89506..90843 [-], 1338 | PUTATIVE AMIDASE PROTEIN | ||
| 76 | msi200 | 90836..91261 [-], 426 | HYPOTHETICAL PROTEIN | ||
| 77 | msi201 | 91872..93149 [-], 1278 | PUTATIVE LIGASE/CARBOXYLASE PROTEIN | ||
| 78 | msi202 | 93443..93598 [-], 156 | HYPOTHETICAL PROTEIN | ||
| 79 | msi203 | 93612..96311 [-], 2700 | FUSION PROTEIN CONTAINS PUTATIVE LIGASE AND PROBABLE ARGINOSUCCINATE LYASE | ||
| 80 | msi204 | 96298..97365 [-], 1068 | PUTATIVE CYSTEINE SYNTHASE PROTEIN | ||
| 81 | msi205 | 97379..98428 [-], 1050 | HYPOTHETICAL PROTEIN | ||
| 82 | msi206 | 98756..99019 [+], 264 | HYPOTHETICAL PROTEIN | ||
| 83 | msi207 | 99163..99861 [-], 699 | HYPOTHETICAL PROTEIN | ||
| 84 | msi208 | 101234..101560 [+], 327 | HYPOTHETICAL PROTEIN | ||
| 85 | msi209 | 101682..102857 [-], 1176 | PUTATIVE HYDROLASE/PEPTIDASE PROTEIN | ||
| 86 | msi210 | 103257..103565 [-], 309 | HYPOTHETICAL PROTEIN | ||
| 87 | msi211 | 103740..105125 [-], 1386 | HYPOTHETICAL CONSERVED TRANSMEMBRANE PROTEIN | ||
| 88 | msi212 | 105128..105316 [-], 189 | HYPOTHETICAL PROTEIN | ||
| 89 | msi213 | 105328..106488 [-], 1161 | PUTATIVE HYDROLASE/PEPTIDASE PROTEIN | ||
| 90 | msi214 | 107676..108524 [-], 849 | HYPOTHETICAL PROTEIN | ||
| 91 | msi215 | 108590..108802 [+], 213 | HYPOTHETICAL PROTEIN | ||
| 92 | msi216 | 109131..109811 [-], 681 | HYPOTHETICAL PROTEIN | ||
| 93 | msi217 | 111793..112200 [+], 408 | HYPOTHETICAL PROTEIN | ||
| 94 | msi218 | 112379..112636 [+], 258 | HYPOTHETICAL PROTEIN | ||
| 95 | msi219 | 112652..112957 [+], 306 | HYPOTHETICAL PROTEIN | ||
| 96 | msi220 | 113055..113252 [+], 198 | HYPOTHETICAL PROTEIN | ||
| 97 | msi221 | 114154..114351 [+], 198 | HYPOTHETICAL PROTEIN | ||
| 98 | msi222 | 122057..123277 [+], 1221 | PUTATIVE TRANSCRIPTION REGULATOR ARAC-FAMILY PROTEIN | ||
| 99 | msi223 | 127743..128984 [+], 1242 | PUTATIVE INTEGRASE/RECOMBINASE PROTEIN | ||
| 100 | msi224 | 128981..129904 [+], 924 | PUTATIVE INTEGRASE/RECOMBINASE PROTEIN | ||
| 101 | msi225 | 129901..130902 [+], 1002 | HYPOTHETICAL INTEGRASE/RECOMBINASE PROTEIN | ||
| 102 | msi226 | 131867..133045 [-], 1179 | PUTATIVE HYDROLASE/PEPTIDASE PROTEIN | ||
| 103 | msi227 | 133052..134863 [-], 1812 | PUTATIVE CONTAINS TWO ABC TRANSPORTER PERMEASE DOMAINS PROTEIN | ||
| 104 | msi228 | 134863..135978 [-], 1116 | PUTATIVE ABC TRANSPORTER PERIPLASMIC BINDING PROTEIN | ||
| 105 | msi229 | 135991..137178 [-], 1188 | PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEIN | ||
| 106 | msi230 | 138656..138913 [-], 258 | HYPOTHETICAL PROTEIN | ||
| 107 | msi231 | 138925..140139 [-], 1215 | PUTATIVE HYDROLASE/PEPTIDASE PROTEIN | ||
| 108 | msi232 | 143025..143606 [-], 582 | PUTATIVE INSERTION ELEMENT TRANSPOSASE PROTEIN | ||
| 109 | msi233 | 143402..143821 [-], 420 | PUTATIVE INSERTION ELEMENT TRANSPOSASE PROTEIN | ||
| 110 | soxG1 | 145006..145530 [-], 525 | PUTATIVE SARCOSINE OXIDASE GAMMA SUBUNIT PROTEIN | ||
| 111 | soxA1 | 145523..148489 [-], 2967 | PROBABLE SARCOSINE OXIDASE ALPHA SUBUNIT TRANSMEMBRANE PROTEIN | ||
| 112 | soxD1 | 148489..148764 [-], 276 | PROBABLE SARCOSINE OXIDASE DELTA SUBUNIT PROTEIN | ||
| 113 | soxB1 | 148783..150033 [-], 1251 | PROBABLE SARCOSINE OXIDASE BETA SUBUNIT PROTEIN | ||
| 114 | msi238 | 150129..151085 [+], 957 | PUTATIVE TRANSCRIPTIONAL REGULATOR PROTEIN | ||
The graph information of ICEMlSym(R7A) components from AL672112 | |||||
 | |||||
| Incomplete gene list of ICEMlSym(R7A) from AL672112 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | intS | 198..1457 [+], 1260 | P4-TYPE SYMBIOSIS ISLAND INTEGRASE PROTEIN | ||
| 2 | msi002 | 1845..3002 [-], 1158 | HYPOTHETICAL PROTEIN | ||
| 3 | msi003 | 3016..4908 [-], 1893 | HYPOTHETICAL PROTEIN | ||
| 4 | msi004 | 4927..6045 [-], 1119 | HYPOTHETICAL PROTEIN | ||
| 5 | msi005 | 6149..6520 [-], 372 | HYPOTHETICAL PROTEIN | ||
| 6 | msi006 | 6544..7041 [+], 498 | HYPOTHETICAL TRANSMEMBRANE PROTEIN | ||
| 7 | msi007 | 7080..7988 [-], 909 | HYPOTHETICAL PROTEIN | ||
| 8 | msi008 | 8041..9972 [-], 1932 | HYPOTHETICAL TRANSMEMBRANE PROTEIN | ||
| 9 | msi009 | 10380..10892 [+], 513 | HYPOTHETICAL PROTEIN | ||
| 10 | fixS | 11322..11471 [-], 150 | PROBABLE NITROGEN FIXATION FIXS TRANSMEMBRANE PROTEIN | ||
| 11 | fixI | 11468..13750 [-], 2283 | PROBABLE FIXI COPPER TRANSPORT ATPASE PROTEIN | ||
| 12 | fixH | 13747..14244 [-], 498 | PROBABLE NITROGEN FIXATION FIXH TRANSMEMBRANE PROTEIN | ||
| 13 | fixG | 14241..15806 [-], 1566 | PROBABLE IRON-SULFUR PROTEIN FIXG | ||
| 14 | fixP | 16010..16873 [-], 864 | PROBABLE FIXP CYTOCHROME C OXIDASE MEMBRANE ANCHORED SUBUNIT PROTEIN | ||
| 15 | fixQ | 16876..17025 [-], 150 | PROBABLE FIXQ CBB3-TYPE CYTOCHROME OXIDASE PROTEIN | ||
| 16 | fixO | 17036..17767 [-], 732 | PROBABLE FIXO CYTOCHROME-C OXIDASE SUBUNIT PROTEIN | ||
| 17 | fixN | 17779..19389 [-], 1611 | PROBABLE FIXN CYTOCHROME C OXIDASE PROTEIN | ||
| 18 | msi018 | 19519..20058 [+], 540 | HYPOTHETICAL PROTEIN | ||
| 19 | fnrN | 20062..20817 [-], 756 | PROBABLE FNR/CRP FAMILY TRANSCRIPTIONAL REGULATOR PROTEIN | ||
| 20 | hemN2 | 20975..22324 [+], 1350 | PROBABLE OXYGEN-INDEPENDENT COPROPORPHYRINOGEN III OXIDASE PROTEIN | ||
| 21 | msi021 | 22863..23135 [-], 273 | HYPOTHETICAL PROTEIN | ||
| 22 | trbI | 23148..24377 [-], 1230 | PROBABLE TRBI CONJUGAL TRANSFER TRANSMEMBRANE PROTEIN | TrbI, T4SS component | |
| 23 | trbG | 24374..25402 [-], 1029 | PROBABLE TRBG CONJUGAL TRANSFER PROTEIN | TrbG, T4SS component | |
| 24 | trbF | 25399..26124 [-], 726 | PROBABLE TRBF CONJUGAL TRANSFER PROTEIN | TrbF, T4SS component | |
| 25 | trbL | 26125..27417 [-], 1293 | PROBABLE TRBL CONJUGAL TRANSFER PROTEIN | TrbL, T4SS component | |
| 26 | trbJ | 27479..28204 [-], 726 | PROBABLE TRBJ CONJUGAL TRANSFER PROTEIN | TrbJ, T4SS component | |
| 27 | trbE | 28201..30651 [-], 2451 | PROBABLE TRBE CONJUGAL TRANSFER PROTEIN | TrbE, T4SS component | |
| 28 | trbD | 30645..30905 [-], 261 | PROBABLE TRBD CONJUGAL TRANSFER PROTEIN | TrbD, T4SS component | |
| 29 | trbC | 30917..31225 [-], 309 | PROBABLE TRBC CONJUGAL TRANSFER PROTEIN | TrbC, T4SS component | |
| 30 | trbB | 31237..32205 [-], 969 | PROBABLE TRBB CONJUGAL TRANSFER PROTEIN | TrbB, T4SS component | |
| 31 | msi031 | 32202..32615 [-], 414 | HYPOTHETICAL PROTEIN | ||
| 32 | traG | 32734..35085 [-], 2352 | PROBABLE TRAG CONJUGAL TRANSFER TRANSMEMBRANE PROTEIN | VirD4, T4SS component | |
| 33 | msi033 | 35426..35815 [-], 390 | HYPOTHETICAL PROTEIN | ||
| 34 | msi034 | 36548..36793 [+], 246 | HYPOTHETICAL PROTEIN | ||
| 35 | hemN1 | 36795..38120 [-], 1326 | PROBABLE OXYGEN-INDEPENDENT COPROPORPHYRINOGEN III OXIDASE PROTEIN | ||
| 36 | omp2a | 39468..40631 [+], 1164 | PROBABLE PORIN PROTEIN | ||
| 37 | msi037 | 41028..41228 [+], 201 | HYPOTHETICAL PROTEIN | ||
| 38 | nodM | 41624..43447 [-], 1824 | PROBABLE NODM AMINOTRANSFERASE GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMIDOTRANSFERASE PROTEIN | ||
| 39 | traI | 43904..44548 [-], 645 | PROBABLE AUTOINDUCER SYNTHESIS PROTEIN TRAI | ||
| 40 | msi040 | 45230..45982 [+], 753 | PROBABLE A-TYPE CARBONIC ANHYDRASE PROTEIN | ||
| 41 | msi041 | 46382..47071 [+], 690 | CONSERVED HYPOTHETICAL PROTEIN | ||
| 42 | msi042 | 47156..47794 [+], 639 | PROBABLE AMINO ACID EFFLUX TRANSMEMBRANE PROTEIN | ||
| 43 | dapA | 47810..48700 [+], 891 | PROBABLE DIHYDRODIPICOLINATE SYNTHASE PROTEIN | ||
| 44 | msi044 | 48730..49155 [-], 426 | HYPOTHETICAL PROTEIN | ||
| 45 | msi045 | 49421..49669 [-], 249 | HYPOTHETICAL PROTEIN | ||
| 46 | virA | 50528..53086 [+], 2559 | PROBABLE VIRA SENSORY TRANSDUCTION HISTIDINE KINASE TRANSMEMBRANE PROTEIN | ||
| 47 | virB11 | 53209..54249 [-], 1041 | PROBABLE VIRB11 TYPE IV SECRETION PROTEIN | VirB11, T4SS component | |
| 48 | virB10 | 54233..55372 [-], 1140 | PROBABLE VIRB10 TYPE IV SECRETION PROTEIN | VirB10, T4SS component | |
| 49 | virB9 | 55369..56250 [-], 882 | PROBABLE VIRB9 TYPE IV SECRETION PROTEIN | VirB9, T4SS component | |
| 50 | virB8 | 56247..56960 [-], 714 | PROBABLE VIRB8 TYPE IV SECRETION PROTEIN | VirB8, T4SS component | |
| 51 | virB7 | 56957..57115 [-], 159 | PROBABLE VIRB7 TYPE IV SECRETION PROTEIN | VirB7, T4SS component | |
| 52 | virB6 | 57142..58029 [-], 888 | PROBABLE VIRB6 TYPE IV SECRETION PROTEIN | VirB6, T4SS component | |
| 53 | virB5 | 58087..58761 [-], 675 | PROBABLE VIRB5 TYPE IV SECRETION PROTEIN | VirB5, T4SS component | |
| 54 | virB4 | 58775..61144 [-], 2370 | PROBABLE VIRB4 TYPE IV SECRETION PROTEIN | VirB4, T4SS component | |
| 55 | virB3 | 61144..61470 [-], 327 | PROBABLE VIRB3 TYPE IV SECRETION PROTEIN | VirB3, T4SS component | |
| 56 | virB2 | 61470..61835 [-], 366 | PROBABLE VIRB2 TYPE IV SECRETION PROTEIN | VirB2, T4SS component | |
| 57 | virB1 | 61850..62632 [-], 783 | PROBABLE VIRB1 TYPE IV SECRETION PROTEIN | VirB1, T4SS component | |
| 58 | virG | 63937..64662 [+], 726 | PROBABLE REGULATORY PROTEIN VIRG | ||
| 59 | msi059 | 65336..70732 [-], 5397 | HYPOTHETICAL PROTEIN | ||
| 60 | virD4 | 70745..72490 [-], 1746 | PROBABLE VIRD4 TYPE IV SECRETION PROTEIN | ||
| 61 | msi061 | 72735..73598 [-], 864 | CONSERVED HYPOTHETICAL PROTEIN | ||
| 62 | csp1 | 73904..74116 [-], 213 | PROBABLE TRANSCRIPTION REGULATOR COLD SHOCK PROTEIN | ||
| 63 | msi063 | 74476..76128 [-], 1653 | PUTATIVE TRANSMEMBRANE EFFLUX PROTEIN | ||
| 64 | msi064 | 76535..77656 [-], 1122 | PROBABLE OXIDOREDUCTASE PROTEIN DEHYDROGENASE | ||
| 65 | msi065 | 77675..78577 [-], 903 | HYPOTHETICAL CONSERVED PROTEIN | ||
| 66 | msi066 | 78574..80406 [-], 1833 | HYPOTHETICAL CONSERVED PROTEIN | ||
| 67 | ispA | 80435..81409 [-], 975 | PROBABLE FARNESYL-DIPHOSPHATE SYNTHASE PROTEIN | ||
| 68 | msi068 | 81551..82888 [-], 1338 | PROBABLE CYTOCHROME P450 MONOOXYGENASE PROTEIN | ||
| 69 | msi069 | 82894..84036 [-], 1143 | PUTATIVE SHORT-CHAIN TYPE DEHYDROGENASE/REDUCTASE PROTEIN | ||
| 70 | msi070 | 84020..85309 [-], 1290 | PROBABLE MONOOXYGENASE CYTOCHROME P450 PROTEIN | ||
| 71 | msi071 | 85404..86606 [-], 1203 | PROBABLE CYTOCHROME P450-LIKE MONOOXYGENASE PROTEIN | ||
| 72 | msi072 | 86940..87119 [+], 180 | HYPOTHETICAL PROTEIN | ||
| 73 | msi073 | 87985..88467 [-], 483 | HYPOTHETICAL PROTEIN | ||
| 74 | msi074 | 89155..89346 [-], 192 | HYPOTHETICAL PROTEIN | ||
| 75 | msi075 | 90368..90940 [+], 573 | HYPOTHETICAL PROTEIN | ||
| 76 | msi076 | 90972..91967 [-], 996 | PUTATIVE TRANSCRIPTION REGULATOR PROTEIN | ||
| 77 | msi077 | 92071..93603 [+], 1533 | PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN | ||
| 78 | msi078 | 93600..94604 [+], 1005 | PROBABLE SUGAR UPTAKE ABC TRANSPORTER, PERMEASE PROTEIN | ||
| 79 | msi079 | 94627..95589 [+], 963 | PROBABLE SUGAR UPTAKE ABC TRANSPORTER PERIPLASMIC SUGAR-BINDING PROTEIN | ||
| 80 | msi080 | 95653..96546 [+], 894 | HYPOTHETICAL CONSERVED PROTEIN | ||
| 81 | msi081 | 96581..97333 [+], 753 | PUTATIVE SHORT-CHAIN TYPE DEHYDROGENASE/REDUCTASE PROTEIN | ||
| 82 | msi082 | 97353..98192 [+], 840 | PROBABLE TRANSKETOLASE ALPHA SUBUNIT PROTEIN | ||
| 83 | msi083 | 98189..99211 [+], 1023 | PROBABLE TRANSKETOLASE BETA SUBUNIT PROTEIN | ||
| 84 | msi084 | 99629..99928 [-], 300 | HYPOTHETICAL PROTEIN | ||
| 85 | msi085 | 99987..101552 [+], 1566 | HYPOTHETICAL CONSERVED PROTEIN | ||
| 86 | msi086 | 101552..102397 [+], 846 | HYPOTHETICAL CONSERVED PROTEIN | ||
| 87 | msi087 | 102824..103726 [-], 903 | HYPOTHETICAL PROTEIN | ||
| 88 | msi088 | 103806..104618 [-], 813 | HYPOTHETICAL PROTEIN | ||
| 89 | msi089 | 104678..107221 [-], 2544 | HYPOTHETICAL PROTEIN | ||
| 90 | msi090 | 107227..108444 [-], 1218 | PUTATIVE AAA ATPASE FAMILY PROTEIN ASSOCIATED WITH VARIOUS CELLULAR ACTIVITIES (PFAM00004) | ||
| 91 | msi091 | 108847..109338 [-], 492 | HYPOTHETICAL PROTEIN | ||
| 92 | msi092 | 109379..111391 [-], 2013 | HYPOTHETICAL PROTEIN | ||
| 93 | msi093 | 111835..114312 [-], 2478 | HYPOTHETICAL PROTEIN | ||
| 94 | msi094 | 114312..115799 [-], 1488 | HYPOTHETICAL PROTEIN | ||
| 95 | msi095 | 115909..116682 [-], 774 | HYPOTHETICAL PROTEIN | ||
| 96 | msi096 | 116779..121434 [+], 4656 | HYPOTHETICAL PROTEIN | ||
| 97 | msi097 | 121598..123874 [+], 2277 | HYPOTHETICAL PROTEIN | ||
| 98 | msi098 | 124082..125140 [-], 1059 | HYPOTHETICAL PROTEIN | ||
| 99 | msi099 | 125234..125743 [-], 510 | HYPOTHETICAL PROTEIN | ||
| 100 | msi100 | 126145..126840 [-], 696 | HYPOTHETICAL CONSERVED PROTEIN | ||
| 101 | msi101 | 126843..127796 [-], 954 | HYPOTHETICAL CONSERVED PROTEIN | ||
| 102 | msi102 | 128280..128813 [+], 534 | HYPOTHETICAL CONSERVED PROTEIN | ||
| 103 | msi103 | 128806..129423 [+], 618 | HYPOTHETICAL CONSERVED PROTEIN | ||
| 104 | msi104 | 129420..129908 [+], 489 | HYPOTHETICAL CONSERVED PROTEIN | ||
| 105 | msi105 | 130013..131470 [+], 1458 | HYPOTHETICAL CONSERVED TRANSMEMBRANE PROTEIN | ||
| 106 | msi106 (rlxS) | 131520..133490 [-], 1971 | HYPOTHETICAL PROTEIN | Relaxase, MOBL Family | |
| 107 | msi107 | 133681..134364 [-], 684 | HYPOTHETICAL PROTEIN | TrbN, T4SS component | |
| 108 | traF | 134352..134900 [-], 549 | PROBABLE TRAF CONJUGAL TRANSFER PROTEIN | TraF, T4SS component | |
| 109 | msi109 (rdfS) | 134897..135166 [-], 270 | HYPOTHETICAL PROTEIN | RdfS; excisionase; [PMID: 17076666] | |
| 110 | msi110 | 135329..135652 [-], 324 | HYPOTHETICAL CONSERVED PROTEIN | TraF, T4SS component | |
| 111 | msi111 | 136184..136438 [-], 255 | HYPOTHETICAL PROTEIN | ||
| 112 | msi112 | 136731..137093 [+], 363 | HYPOTHETICAL PROTEIN | ||
| 113 | msi113 | 137783..139009 [+], 1227 | HYPOTHETICAL CONSERVED MEMBRANE TRANSMEMBRANE PROTEIN | ||
| 114 | msi114 | 139157..139372 [+], 216 | HYPOTHETICAL PROTEIN | ||
| 115 | nodD1 | 139758..140663 [-], 906 | NODD TRANSCRIPTIONAL REGULATOR PROTEIN | ||
| 116 | nolL | 140871..141992 [-], 1122 | ACETYL TRANSFERASE, NODULATION PROTEIN NOLL | ||
| 117 | msi117 | 142171..142503 [+], 333 | HYPOTHETICAL PROTEIN | ||
| 118 | nodD2 | 142709..143653 [+], 945 | HYPOTHETICAL NODD TRANSCRIPTIONAL REGULATOR PROTEIN | ||
| 119 | msi119 | 143668..144480 [-], 813 | HYPOTHETICAL CONSERVED PROTEIN | ||
| 120 | msi120 | 144776..145426 [-], 651 | PROBABLE AMINO ACID EFFLUX PROTEIN | ||
| 121 | msi121 | 145454..146077 [-], 624 | PUTATIVE TRANSCRIPTIONAL REGULATOR PROTEIN | ||
| 122 | nodB | 146575..147234 [-], 660 | NODB CHITOOLIGOSACCHARIDE DEACETYLASE PROTEIN | ||
| 123 | msi123 | 147370..147549 [-], 180 | HYPOTHETICAL PROTEIN | ||
| 124 | msi124 | 147735..149204 [-], 1470 | PROBABLE TRANSCRIPTIONAL REGULATOR GNTR-FAMILY PROTEIN | ||
The graph information of ICEMlSym(R7A) components from AL672115 | |||||
 | |||||
| Incomplete gene list of ICEMlSym(R7A) from AL672115 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | groES | 716..1012 [+], 297 | PROBABLE CHAPERONIN PROTEIN GROES | ||
| 2 | groEL | 1075..2733 [+], 1659 | PROBABLE CHAPERONIN GROEL DF PROTEIN | ||
| 3 | msi376 | 2992..3177 [+], 186 | HYPOTHETICAL PROTEIN | ||
| 4 | gabD | 3284..4777 [+], 1494 | PUTATIVE SUCCINATE-SEMIALDEHYDE DEHYDROGENASE PROTEIN | ||
| 5 | msi378 | 5085..5549 [-], 465 | PUTATIVE TRANSCRIPTIONAL REGULATOR PROTEIN | ||
| 6 | msi379 | 5782..5991 [-], 210 | HYPOTHETICAL PROTEIN | ||
| 7 | msi380 | 6095..7180 [-], 1086 | PROBABLE CYTOCHROME C PEROXIDASE PROTEIN | ||
| 8 | msi381 | 7968..8228 [+], 261 | PUTATIVE TRANSCRIPTIONAL REGULATOR DNA-BINDING REPRESSOR PROTEIN | ||
| 9 | msi382 | 8496..8702 [-], 207 | HYPOTHETICAL PROTEIN | ||
| 10 | noeJ | 9248..10663 [-], 1416 | PROBABLE PHOSPHOMANNOSE ISOMERASE/GDP-MANNOSE PYROPHOSPHORYLASE NODULATION PROTEIN NOEJ | ||
| 11 | noeK | 10663..12096 [-], 1434 | PROBABLE PHOSPHOMANNOMUTASE NODULATION PROTEIN NOEK | ||
| 12 | msi385 | 12604..13017 [+], 414 | HYPOTHETICAL PROTEIN | ||
| 13 | msi386 | 13578..14276 [+], 699 | HYPOTHETICAL CONSERVED PROTEIN | ||
| 14 | msi387 | 14276..14632 [+], 357 | PUTATIVE 6-PYRUVOYL TETRAHYDROPTERIN SYNTHASE PROTEIN | ||
| 15 | msi388 | 14629..15366 [+], 738 | HYPOTHETICAL CONSERVED PROTEIN | ||
| 16 | thiC | 15844..17703 [+], 1860 | PROBABLE THIAMIN BIOSYNTHESIS PROTEIN THIC | ||
| 17 | thiO | 17700..18701 [+], 1002 | PROBABLE THIAMIN BIOSYNTHESIS OXIDOREDUCTASE THIO PROTEIN | ||
| 18 | thiS | 18670..18867 [+], 198 | PROBABLE THIAMIN BIOSYNTHESIS PROTEIN THIS | ||
| 19 | thiG | 18869..19642 [+], 774 | PROBABLE THIAMIN BIOSYNTHESIS PROTEIN THIG | ||
| 20 | thiE | 19639..20244 [+], 606 | PROBABLE THIAMIN-PHOSPHATE PYROPHOSPHORYLASE PROTEIN | ||
| 21 | thiD | 20235..21005 [+], 771 | PROBABLE PHOSPHOMETHYLPYRIMIDINE KINASE (THIAMIN SYNTHESIS) PROTEIN | ||
| 22 | msi395 | 21267..22295 [-], 1029 | PUTATIVE MONOOXYGENASE OXIDOREDUCTASE PROTEIN | ||
| 23 | msi396 | 22422..23531 [-], 1110 | PUTATIVE AMINOTRANSFERASE PYRIDOXAL PHOSPHATE PROTEIN | ||
| 24 | msi397 | 26568..26834 [+], 267 | PUTATIVE INSERTION ELEMENT TRANSPOSASE PROTEIN | ||
| 25 | msi398 | 27583..28512 [-], 930 | PUTATIVE TRANSPOSASE FOR INSERTION ELEMENT PROTEIN | ||
| 26 | msi399 | 28506..28772 [-], 267 | PUTATIVE TRANSPOSASE FOR INSERTION SEQUENCE | ||
| 27 | msi400 | 29446..31221 [-], 1776 | HYPOTHETICAL PROTEIN | ||
| 28 | msi401 | 31218..34799 [-], 3582 | PUTATIVE HELICASE PROTEIN ATP-BINDING | ||
| 29 | msi402 | 34849..35466 [+], 618 | HYPOTHETICAL PROTEIN | ||
| 30 | msi403 | 35670..35894 [-], 225 | HYPOTHETICAL PROTEIN | ||
| 31 | msi404 | 36298..36549 [-], 252 | HYPOTHETICAL PROTEIN | ||
| 32 | msi405 | 36892..37338 [-], 447 | HYPOTHETICAL PROTEIN | ||
| 33 | msi406 | 37512..37832 [-], 321 | HYPOTHETICAL PROTEIN | ||
| 34 | msi407 | 38022..39728 [-], 1707 | HYPOTHETICAL CONSERVED PROTEIN | ||
| 35 | msi408 | 39966..40802 [+], 837 | HYPOTHETICAL PROTEIN | ||
| 36 | msi409 | 41154..43016 [-], 1863 | HYPOTHETICAL PROTEIN | ||
| 37 | msi410 | 43055..44065 [-], 1011 | HYPOTHETICAL PROTEIN | ||
| 38 | msi411 | 44419..46293 [+], 1875 | HYPOTHETICAL PROTEIN | ||
| 39 | msi412 | 46476..47273 [-], 798 | HYPOTHETICAL PROTEIN | ||
| 40 | msi413 | 47481..48581 [+], 1101 | HYPOTHETICAL PROTEIN | ||
| 41 | msi414 | 48691..49620 [+], 930 | HYPOTHETICAL CLASS I NUCLEASE PROTEIN | ||
|
(1) Ramsay JP; Major AS; Komarovsky VM; Sullivan JT; Dy RL; Hynes MF; Salmond GP; Ronson CW (2012). A widely conserved molecular switch controls quorum sensing and symbiosis island transfer in Mesorhizobium loti through expression of a novel antiactivator. Mol Microbiol. . [PubMed:23106190]
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(6) Sullivan JT; Ronson CW (1998). Evolution of rhizobia by acquisition of a 500-kb symbiosis island that integrates into a phe-tRNA gene. Proc Natl Acad Sci U S A. 95(9):5145-9. [PubMed:9560243]
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