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Gene list
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References
I. Information of ICE
ICEberg ID
65
Name
CTnGERM1
ICEO ID
ICEO_0000721
Organism
Bacteroides ovatus
Size (bp)
~75 kb
GC content [Genome] (%)
-
Insertion site
-
Function
Erythromycin resistance
Species that ICE can be transferred to
Bacteroides
spp.
Nucleotide Sequence
AJ557257
(partial ICE sequence)
Putative
oriT
region
-
Putative relaxase
-
II. ICE interaction with IME/CIME/
The interaction information of CTnGERM1 is not available.
The graph information of CTnGERM1 components from
AJ557257
Incomplete gene list of CTnGERM1 from
AJ557257
#
Gene
Coordinates [+/-], size (bp)
Product
(GenBank annotation)
*Reannotation
1
-
1009..1368 [+], 360
hypothetical protein
2
tnpIS
1556..2785 [+], 1230
TnpIS
3
-
4765..5259 [-], 495
hypothetical protein
4
ermG
6631..7365 [-], 735
ErmG
AR
5
-
7486..7860 [-], 375
hypothetical protein
6
-
8137..9420 [-], 1284
ABC transporter
7
mefA
9922..10854 [-], 933
MefA
AR
8
-
11537..12895 [-], 1359
hypothetical protein
9
-
13490..15937 [-], 2448
hypothetical protein
10
-
16006..17127 [-], 1122
hypothetical protein
11
-
17171..18373 [-], 1203
hypothetical protein
Element
No. of sequences
Download
Nucleotide sequences
1
Fasta
Proteins
11
Fasta
(1) Wang Y; Wang GR; Shelby A; Shoemaker NB; Salyers AA (2003). A newly discovered Bacteroides conjugative transposon, CTnGERM1, contains genes also found in gram-positive bacteria.
Appl Environ Microbiol
. 69(8):4595-603. [
PubMed:12902247
]
experimental literature