 ICEberg ID | 64 |
Name  | CTnBST  |
| ICEO ID | ICEO_0000171 |
| Organism | Bacteroides uniformis WH207 |
| Size (bp) | 100903 |
| GC content [Genome] (%) | 47.49 |
| Insertion site | AATCTGNNAAAT |
| Function | Erythromycin resistance |
| Species that ICE can be transferred to | Bacteroides spp.; Escherichia coli |
| Nucleotide Sequence | AY345595 (complete ICE sequence in this GenBank file) |
| Replicon | - |
| Coordinates | 1..100903 |
| Putative oriT region | - |
| Putative relaxase | coordinates: 89077..90462; Locus tag: bst104; Family: MOBV |
The graph information of CTnBST components from AY345595 | |||||
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| Complete gene list of CTnBST from AY345595 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | int | 231..1364 [+], 1134 | integrase | Integrase | |
| 2 | xis | 2438..2833 [+], 396 | excisionase | ||
| 3 | bst004 | 2811..3911 [+], 1101 | hypothetical protein | ||
| 4 | bst005 | 4078..4905 [+], 828 | hypothetical protein | ||
| 5 | bst006 | 5150..5593 [+], 444 | hypothetical protein | ||
| 6 | bst007 | 5609..5932 [+], 324 | hypothetical protein | ||
| 7 | bst008 | 5982..6359 [+], 378 | hypothetical protein | ||
| 8 | bst009 | 6372..6668 [+], 297 | hypothetical protein | ||
| 9 | bst010 | 6773..9478 [+], 2706 | hypothetical protein | ||
| 10 | bst011 | 9506..9919 [+], 414 | hypothetical protein | ||
| 11 | bst014 | 13229..13987 [+], 759 | hypothetical protein | ||
| 12 | bst015 | 14009..15142 [+], 1134 | hypothetical protein | ||
| 13 | bst016 | 15185..15580 [+], 396 | hypothetical protein | ||
| 14 | bst017 | 15587..16201 [+], 615 | hypothetical protein | ||
| 15 | bst018 | 16214..16603 [+], 390 | hypothetical protein | ||
| 16 | bst019 | 16600..17745 [+], 1146 | hypothetical protein | ||
| 17 | bst020 | 17610..18113 [+], 504 | hypothetical protein | ||
| 18 | bst021 | 18110..18889 [+], 780 | hypothetical protein | ||
| 19 | bst022 | 18930..19787 [+], 858 | hypothetical protein | ||
| 20 | bst023 | 19784..20233 [+], 450 | hypothetical protein | ||
| 21 | bst024 | 20307..20978 [+], 672 | hypothetical protein | ||
| 22 | bst025 | 21027..22031 [-], 1005 | hypothetical protein | ||
| 23 | bst026 | 22016..22735 [-], 720 | hypothetical protein | ||
| 24 | bst027 | 22887..25073 [+], 2187 | hypothetical protein | T4CP | |
| 25 | bst028 | 25070..25603 [+], 534 | hypothetical protein | ||
| 26 | bst029 | 25750..26664 [-], 915 | hypothetical protein | ||
| 27 | bst030 | 26714..27868 [-], 1155 | hypothetical protein | ||
| 28 | bst031 | 27934..29238 [-], 1305 | hypothetical protein | ||
| 29 | bst032 | 29482..30381 [-], 900 | hypothetical protein | ||
| 30 | bst033 | 30475..31038 [+], 564 | hypothetical protein | ||
| 31 | bst034 | 31038..31688 [+], 651 | hypothetical protein | ||
| 32 | bst035 | 31826..32194 [-], 369 | hypothetical protein | ||
| 33 | bst036 | 32228..32500 [-], 273 | hypothetical protein | ||
| 34 | bst037 | 32508..32786 [-], 279 | hypothetical protein | ||
| 35 | bst038 | 33317..33760 [-], 444 | hypothetical protein | ||
| 36 | bst040 | 36602..37099 [-], 498 | hypothetical protein | ||
| 37 | bst041 | 37096..37494 [-], 399 | hypothetical protein | ||
| 38 | bst042 | 37515..38054 [-], 540 | hypothetical protein | ||
| 39 | bst043 | 38057..38677 [-], 621 | hypothetical protein | ||
| 40 | bst044 | 38700..38954 [-], 255 | hypothetical protein | ||
| 41 | bst045 | 38962..39717 [-], 756 | hypothetical protein | ||
| 42 | bst046 | 39951..40364 [-], 414 | hypothetical protein | ||
| 43 | bst047 | 41172..41585 [-], 414 | hypothetical protein | ||
| 44 | bst049 | 42525..43043 [+], 519 | hypothetical protein | ||
| 45 | bst051 | 48743..49384 [-], 642 | hypothetical protein | ||
| 46 | bst052 | 49952..51463 [-], 1512 | hypothetical protein | ||
| 47 | bst054 | 52883..53278 [-], 396 | hypothetical protein | ||
| 48 | bst055 | 53420..53803 [-], 384 | hypothetical protein | ||
| 49 | bst056 | 54253..54720 [+], 468 | hypothetical protein | ||
| 50 | bst057 | 55339..55884 [+], 546 | hypothetical protein | ||
| 51 | bst058 | 55981..56346 [+], 366 | hypothetical protein | ||
| 52 | bst059 | 56343..57368 [-], 1026 | hypothetical protein | ||
| 53 | ermB | 58061..58798 [+], 738 | ErmB | AR | |
| 54 | bst063 | 58803..58934 [+], 132 | hypothetical protein | ||
| 55 | bst066 | 59372..59587 [+], 216 | hypothetical protein | ||
| 56 | bst067 | 59604..59876 [+], 273 | hypothetical protein | ||
| 57 | bst072 | 61137..62003 [+], 867 | hypothetical protein | AR | |
| 58 | bst074 | 62211..62564 [+], 354 | hypothetical protein | ||
| 59 | bst075 | 63688..64539 [+], 852 | hypothetical protein | ||
| 60 | bst076 | 64848..65072 [-], 225 | hypothetical protein | ||
| 61 | bst077 | 65231..65566 [-], 336 | hypothetical protein | ||
| 62 | bst078 | 65588..66256 [-], 669 | hypothetical protein | ||
| 63 | bst079 | 66475..67233 [+], 759 | hypothetical protein | ||
| 64 | bst080 | 67246..67470 [+], 225 | hypothetical protein | ||
| 65 | bst081 | 67529..68995 [+], 1467 | hypothetical protein | ||
| 66 | bst083 | 70165..70653 [+], 489 | hypothetical protein | ||
| 67 | bst084 | 70634..71329 [+], 696 | hypothetical protein | ||
| 68 | bst085 | 71341..72024 [+], 684 | hypothetical protein | ||
| 69 | bst086 | 72037..72702 [+], 666 | hypothetical protein | ||
| 70 | bst087 | 72727..73557 [+], 831 | hypothetical protein | ||
| 71 | bst088 | 73629..73865 [+], 237 | hypothetical protein | ||
| 72 | bst089 | 73873..75669 [+], 1797 | hypothetical protein | ||
| 73 | bst091 | 78085..79635 [+], 1551 | hypothetical protein | TcpG, T4SS component | |
| 74 | bst092 | 79632..79823 [+], 192 | hypothetical protein | ||
| 75 | bst093 | 79870..80514 [+], 645 | hypothetical protein | ||
| 76 | bst094 | 80520..82208 [+], 1689 | hypothetical protein | ||
| 77 | bst095 | 82249..82539 [-], 291 | hypothetical protein | ||
| 78 | bst096 | 82592..82864 [-], 273 | hypothetical protein | ||
| 79 | bst097 | 82871..83356 [-], 486 | hypothetical protein | ||
| 80 | bst098 | 83879..84364 [-], 486 | hypothetical protein | ||
| 81 | bst099 | 84297..84608 [-], 312 | hypothetical protein | ||
| 82 | bst100 | 85096..85944 [+], 849 | hypothetical protein | ||
| 83 | bst101 | 86573..87157 [-], 585 | hypothetical protein | ||
| 84 | bst102 | 87334..87507 [+], 174 | hypothetical protein | ||
| 85 | bst103 | 87658..88623 [-], 966 | hypothetical protein | ||
| 86 | bst104 | 89077..90462 [-], 1386 | hypothetical protein | Relaxase, MOBV Family | |
| 87 | bst105 | 90755..91342 [-], 588 | hypothetical protein | ||
| 88 | bst106 | 91284..91598 [-], 315 | hypothetical protein | ||
| 89 | bst107 | 91634..92179 [-], 546 | hypothetical protein | ||
| 90 | bst108 | 92170..92571 [-], 402 | hypothetical protein | ||
| 91 | bst109 | 93118..94089 [-], 972 | hypothetical protein | ||
| 92 | bst110 | 94327..94875 [+], 549 | hypothetical protein | ||
| 93 | bst111 | 94979..96187 [+], 1209 | hypothetical protein | ||
| 94 | bst112 | 96639..96920 [-], 282 | hypothetical protein | ||
| 95 | bst113 | 96949..97263 [-], 315 | hypothetical protein | ||
| 96 | bst114 | 97287..97517 [-], 231 | hypothetical protein | ||
| 97 | bst115 | 97619..98002 [-], 384 | hypothetical protein | ||
| 98 | bst117 | 98756..99046 [-], 291 | hypothetical protein | ||
| 99 | bst118 | 99030..99332 [-], 303 | hypothetical protein | ||
| 100 | bst119 | 99345..99677 [-], 333 | hypothetical protein | ||
| 101 | bst120 | 99871..100164 [-], 294 | hypothetical protein | ||
|
(1) Song B; Shoemaker NB; Gardner JF; Salyers AA (2007). Integration site selection by the Bacteroides conjugative transposon CTnBST. J Bacteriol. 189(18):6594-601. [PubMed:17616597]
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(2) Schlesinger DJ; Shoemaker NB; Salyers AA (2007). Possible origins of CTnBST, a conjugative transposon found recently in a human colonic Bacteroides strain. Appl Environ Microbiol. 73(13):4226-33. [PubMed:17483268]
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(3) Wesslund NA; Wang GR; Song B; Shoemaker NB; Salyers AA (2007). Integration and excision of a newly discovered bacteroides conjugative transposon, CTnBST. J Bacteriol. 189(3):1072-82. [PubMed:17122349]
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(4) Gupta A; Vlamakis H; Shoemaker N; Salyers AA (2003). A new Bacteroides conjugative transposon that carries an ermB gene. Appl Environ Microbiol. 69(11):6455-63. [PubMed:14602600]
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| experimental literature |