 ICEberg ID | 63 |
Name  | CTn86  |
| ICEO ID | ICEO_0000720 |
| Organism | Bacteroides fragilis 86-5443-2-2 |
| Size (bp) | - |
| GC content [Genome] (%) | - |
| Insertion site | - |
| Function | - |
| Species that ICE can be transferred to | Bacteroides fragilis |
| Nucleotide Sequence | AY372755; AY375536 (partial ICE sequence) |
| Putative oriT region | - |
| Putative relaxase | - |
The graph information of CTn86 components from AY372755 | |||||
 | |||||
| Incomplete gene list of CTn86 from AY372755 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | per | 302..1915 [+], 1614 | ABC transporter permease protein | ||
| 2 | tnpB | 1871..2713 [-], 843 | TnpB | ||
| 3 | tnpA1 | 2682..4241 [-], 1560 | TnpA1 | Integrase | |
| 4 | - | 5152..6096 [-], 945 | unknown | ||
| 5 | bfmA | 7727..8269 [+], 543 | BfmA | ||
| 6 | bfmB | 8259..9209 [+], 951 | BfmB | ||
| 7 | - | 9470..9847 [+], 378 | unknown | ||
| 8 | bft | 10117..11286 [-], 1170 | Bft | ||
| 9 | mpII | 12998..14188 [+], 1191 | MpII | ||
| 10 | bfmC | 15246..16850 [-], 1605 | BfmC | T4CP | |
| 11 | - | 16929..17282 [-], 354 | unknown | ||
| 12 | - | 17293..20040 [-], 2748 | unknown | ||
| 13 | - | 20037..20957 [-], 921 | unknown | ||
| 14 | - | 21045..22352 [-], 1308 | unknown | ||
| 15 | - | 22358..22762 [-], 405 | unknown | ||
| 16 | - | 23329..23889 [+], 561 | RNA polymerase ECF-type sigma factor | ||
The graph information of CTn86 components from AY375536 | |||||
 | |||||
| Incomplete gene list of CTn86 from AY375536 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | - | 259..702 [-], 444 | ORF-58A | ||
| 2 | - | 890..1501 [-], 612 | ORF-58B | ||
| 3 | - | 1540..2037 [-], 498 | ORF-59 | ||
| 4 | - | 2956..3273 [-], 318 | ORF-60 | ||
| 5 | tnpA2 | 4052..4426 [-], 375 | TnpA2 | ||
| 6 | bexB | 4599..5963 [-], 1365 | putative Na+-driven multidrug efflux pump | ||
 Flanking regions |
|
(1) Franco AA (2004). The Bacteroides fragilis pathogenicity island is contained in a putative novel conjugative transposon. J Bacteriol. 186(18):6077-92. [PubMed:15342577]
|
| experimental literature |