I. Information of ICE
ICEberg ID57
Name ICEclc(JS705) This ICE is derived from experimental literature
ICEO ID ICEO_0000702
OrganismRalstonia sp. JS705
Size (bp)-
GC content [Genome] (%)-
Insertion sitetRNA-Gly
FunctionChlorobenzene degradative pathway
Species that ICE can be transferred toPseudomonas putida; Pseudomonas aeruginosa; Cupriavidus necator
Nucleotide SequenceAJ006307 (partial ICE sequence)
Putative oriT region -
Putative relaxase -

II. ICE interaction with IME/CIME/

The interaction information of ICEclc(JS705) is not available.

The graph information of ICEclc(JS705) components from AJ006307
Incomplete gene list of ICEclc(JS705) from AJ006307
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
1clcR687..1571 [-], 885ClcR
2clcA1741..2523 [+], 783chlorocatechol 1,2-dioxygenase
3mcbF3036..3866 [+], 8312-hydroxy-6-oxohepta-2,4-dienoate hydrolase
4mcbAa3960..5315 [+], 1356terminal oxygenase large subunit
5mcbAb5426..5989 [+], 564terminal oxygenase small subunit
6mcbAc6000..6323 [+], 324ferredoxin
7mcbAd6323..7555 [+], 1233reductase
8mcbB7552..8379 [+], 828cis-chlorobenzene dihydrodiol dehydrogenase
9tnpA8574..9818 [+], 1245transposase
10clcR12271..12483 [-], 213transcriptional activator

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
(1) Sentchilo V; Czechowska K; Pradervand N; Minoia M; Miyazaki R; van der Meer JR (2009). Intracellular excision and reintegration dynamics of the ICEclc genomic island of Pseudomonas knackmussii sp. strain B13. Mol Microbiol. 72(5):1293-306. [PubMed:19432799] experimental
(2) Muller TA; Werlen C; Spain J; Van Der Meer JR (2003). Evolution of a chlorobenzene degradative pathway among bacteria in a contaminated groundwater mediated by a genomic island in Ralstonia. Environ Microbiol. 5(3):163-73. [PubMed:12588296] experimental
experimental experimental literature