ICEberg
I. Information of ICE
ICEberg ID52
Name ICEPaeLESB58-1 This is a putative ICE identified in this study by Blast
OrganismPseudomonas aeruginosa LESB58
Size (bp)111102
GC content [Genome] (%)64.42[66.42]
Insertion sitetRNA-Gly(PLES_26042)
FunctionMercuric resistance
Species that ICE can be transferred to-
Nucleotide SequenceFM209186 (complete ICE sequence in this genome)
Replicon chromosome (6601757 bp, BioProject:31101) [NC_011770]
Genome coordinates2796710..2907811 
Putative oriT region -
Putative relaxase coordinates: 2839054..2840925; Locus tag: PLES_26421;  Family:  MOBH


II. ICE interaction with IME/CIME/

The interaction information of ICEPaeLESB58-1 is not available.



The graph information of ICEPaeLESB58-1 components from FM209186
Complete gene list of ICEPaeLESB58-1 from FM209186
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)		 *Reannotation 
1pqsH2792010..2793158 [+], 1149probable FAD-dependent monooxygenase
2gacA2793500..2794144 [+], 645response regulator GacA
3uvrC2794145..2795971 [+], 1827excinuclease ABC subunit C
4pgsA2796005..2796565 [+], 561CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
5PLES_260512796936..2798879 [+], 1944phage-related integraseIntegrase 
6PLES_260612798946..2799587 [-], 642transcriptional regulator, LysR family
7PLES_260712800012..2800905 [-], 894transcriptional regulator, LysR family
8PLES_260812801226..2801822 [-], 5974-hydroxyphenylpyruvate dioxygenase (pseudogene)
9PLES_260912801863..2802039 [+], 177transcriptional regulator, AsnC family (pseudogene)
10PLES_261012802140..2802334 [+], 195Heavy metal transport/detoxification protein
11PLES_261112802409..2802636 [-], 228glutaredoxin (pseudogene)
12PLES_261212802873..2803145 [-], 273glutaredoxin
13fdx2803369..2803707 [-], 339[2Fe-2S] ferredoxin
14PLES_261412803723..2804202 [-], 480transcriptional regulator, MerR family
15PLES_261512804218..2806647 [-], 2430hypothetical protein
16PLES_261612807081..2807305 [+], 225hypothetical protein
17PLES_261712807415..2808572 [-], 1158dihydrolipoamide dehydrogenase
18PLES_261812809400..2812546 [-], 3147heavy metal efflux pump, CzcA family
19PLES_261912812560..2813459 [-], 900hypothetical protein
20PLES_262012814258..2815349 [-], 1092outer membrane efflux protein (pseudogene)
21PLES_262112815869..2816126 [+], 258protein of unknown function DUF156
22PLES_262212816136..2817446 [+], 1311putative nrbE-like protein
23efflux2817640..2818602 [+], 963cation efflux family protein
24PLES_262412818646..2819023 [+], 378transcriptional regulator, ArsR family
25PLES_262512819556..2819822 [+], 267hypothetical protein
26PLES_262612819989..2822703 [+], 2715heavy metal translocating P-type ATPase
27PLES_262712822815..2823417 [+], 603efflux transporter, RND family, MFP subunit
28PLES_262812824136..2827312 [+], 3177transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
29PLES_262912827333..2828838 [+], 1506RND efflux system, outer membrane lipoprotein, NodT family
30PLES_263012829354..2830535 [+], 1182major facilitator superfamily MFS_1
31PLES_263112830987..2831127 [+], 141hypothetical protein
32PLES_263212831394..2832848 [+], 1455mercuric reductase
33PLES_263312833295..2834071 [+], 777major facilitator superfamily MFS_1 (pseudogene)
34PLES_263412834118..2834621 [-], 504hypothetical protein
35PLES_263512834803..2835192 [-], 390hypothetical protein
36PLES_263612835545..2836240 [+], 696transcriptional regulator, GntR family
37PLES_263712836396..2836806 [-], 411transcriptional regulator, GntR family
38PLES_263812836987..2837688 [+], 702putative exported protein
39PLES_263912837699..2837956 [+], 258glutaredoxin
40PLES_264012838131..2839003 [+], 8732-dehydro-3-deoxyphosphooctonate aldolase
41PLES_264212839054..2840925 [-], 1872RelaxaseRelaxase, MOBH Family
42PLES_264312841242..2841868 [+], 627hypothetical protein
43PLES_264412841881..2842513 [+], 633hypothetical protein
44PLES_264512842598..2842963 [+], 366conserved hypothetical protein
45PLES_264612842975..2844495 [-], 1521STY4579Tfc19, T4SS component 
46PLES_264712844511..2844882 [-], 372hypothetical protein
47PLES_264812844879..2846276 [-], 1398conserved hpothetical proteinTfc22, T4SS component 
48PLES_264912846286..2847233 [-], 948conserved hypothetical proteinTfc23, T4SS component 
49PLES_265012847230..2847622 [-], 393hypothetical proteinTfc24, T4SS component 
50PLES_265112847839..2848333 [-], 495RadC family DNA repair protein
51PLES_265212848516..2849301 [-], 786conserved hypothetical protein
52PLES_265312849315..2852200 [-], 2886conserved hypothetical proteinTfc16, T4SS component 
53PLES_265412852621..2854039 [-], 1419conserved hypothetical proteinTfc14, T4SS component 
54PLES_265512854937..2855629 [-], 693conserved hypothetical proteinTfc12, T4SS component 
55PLES_265612855626..2855958 [-], 333hypothetical proteinTfc11, T4SS component 
56PLES_265712856049..2856408 [-], 360conserved hypothetical proteinTfc10, T4SS component 
57PLES_265812856425..2856658 [-], 234hypothetical protein
58PLES_265912856655..2857038 [-], 384plasmid Ignore, RAQPRD familyTfc9, T4SS component 
59PLES_266012857242..2857712 [+], 471DNA binding domain, excisionase family
60PLES_266112857709..2858284 [+], 576conserved hypothetical protein
61PLES_266212858302..2859216 [+], 915AAA ATPase, central domain protein
62PLES_266312859680..2860180 [+], 501hypothetical protein
63PLES_266412860180..2861082 [+], 903hypothetical protein
64PLES_266512861121..2861846 [+], 726hypothetical protein
65PLES_266612861898..2864480 [+], 2583COG1196: Chromosome segregation ATPases
66PLES_266712865267..2867456 [-], 2190conserved hypothetical proteinTfc6, T4SS component 
67PLES_266812867461..2867964 [-], 504conserved hypothetical proteinTfc5, T4SS component 
68PLES_266912868006..2868575 [-], 570conserved hypothetical proteinTfc4, T4SS component 
69PLES_267012868578..2869315 [-], 738conserved hypothetical proteinTfc3, T4SS component 
70PLES_267112869328..2869972 [-], 645putative secreted proteinTfc2, T4SS component 
71PLES_267212869969..2870430 [-], 462putative secreted proteinTfc2, T4SS component 
72PLES_267312870707..2872986 [-], 2280conserved hypothetical protein
73PLES_267412873123..2873428 [-], 306hypothetical protein
74PLES_267512873518..2873838 [-], 321hypothetical protein
75PLES_267612873889..2874998 [-], 1110conserved hypothetical, plasmid-related protein
76PLES_267712875063..2875710 [-], 648hypothetical protein
77PLES_267812875787..2876047 [-], 261conserved Hypothetical protein
78PLES_267912876064..2876471 [-], 408conserved Hypothetical protein
79PLES_268012876576..2876917 [-], 342conserved plasmid protein
80PLES_268112877012..2877701 [-], 690hypothetical protein
81PLES_268212877796..2878623 [-], 828protein of unknown function DUF932
82PLES_268312878769..2879767 [-], 999hypothetical protein
83PLES_268412879985..2880269 [-], 285hypothetical protein
84PLES_268512880577..2880837 [-], 261hypothetical protein
85PLES_268612881389..2881904 [-], 516Tn3 family transposase (pseudogene)
86merA2881923..2883611 [-], 1689Mercuric reductase MerA
87merP2883622..2883909 [-], 288Periplasmic mercuric ion binding protein, MerP
88merT2883922..2884272 [-], 351Mercuric transport protein MerT
89merR2884344..2884751 [+], 408Regulatory protein merR
90PLES_269112885013..2885837 [-], 825COG1100: GTPase SAR1 and related small G proteins
91PLES_269212886126..2886404 [-], 279COG0528: Uridylate kinase
92PLES_269312886502..2887239 [-], 738COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
93ORF C922887323..2888009 [-], 687hypothetical protein
94PLES_269512888192..2888584 [-], 393hypothetical protein
95PLES_269612888606..2889019 [-], 414conserved hypothetical protein
96PLES_269712889156..2889467 [-], 312hypothetical protein
97PLES_269812889804..2890304 [-], 501putative lipoprotein signal peptidase LspA
98PLES_269912890308..2893262 [-], 2955Heavy metal translocating P-type ATPase
99metR2893315..2893710 [+], 396transcriptional regulator, MerR family
100PLES_270022894786..2895421 [+], 636Co/Zn/Cd efflux system component
101PLES_270112896145..2898175 [-], 2031DNA topoisomerase III
102PLES_270212898459..2898899 [-], 441Putative single-stranded DNA binding protein
103PLES_270312898973..2899500 [-], 528Putative integrase regulator R protein
104PLES_270412899497..2900288 [-], 792Domain of unknown function DUF1845
105PLES_270512900718..2901956 [-], 1239hypothetical protein
106PLES_270612901960..2902520 [-], 561COG0635: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
107PLES_270712902535..2904214 [-], 1680COG1475: Predicted transcriptional regulators
108PLES_270812904460..2905335 [-], 876Cobyrinic acid a,c-diamide synthase
109ORF C1092905378..2905590 [-], 213phage-related protein
110PLES_271012905709..2906455 [-], 747hypothetical protein
111PLES_271022906906..2907406 [+], 501hypothetical protein
112PLES_271112908559..2911444 [+], 2886probable sensor/response regulator hybrid
113PLES_271212911535..2912068 [+], 534putative activator of osmoprotectant transporter
 
flank Flanking regions

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins101Fasta
Identified as part of this study from FM209186

Genomics & Bioinformatics Group in MML, SJTU