ICEberg

ICE
Gene list
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References

I. Information of ICE

ICEberg ID	461
Name	ICEShaPor1
ICEO ID	ICEO_0000605
Organism	Shewanella haliotis AC6
Size (bp)	-
GC content [Genome] (%)	-
Insertion site	prfC
Function	-
Species that ICE can be transferred to	Escherichia coli CAG18420; Escherichia coli BI533
Nucleotide Sequence	HE577620 (partial ICE sequence)
Putative oriT region	-
Putative relaxase	-

II. ICE interaction with IME/CIME/

The interaction information of ICEShaPor1 is not available.

The graph information of ICEShaPor1 components from HE577620

Incomplete gene list of ICEShaPor1 from HE577620
#	Gene	Coordinates [+/-], size (bp)	Product (GenBank annotation)	*Reannotation
1	ORF36	1..52 [+], 52	putative conjugation coupling factor
2	traL	955..1003 [+], 49	putative TraL sex pilus assembly and synthesis protein	TraL_F, T4SS component
3	mosA	1087..1920 [+], 834	putative MosA antitoxin component
4	mosT	1913..2851 [+], 939	putative MosT toxin component
5	spa02	6157..7266 [+], 1110	hypothetical protein
6	spa03	7279..8811 [+], 1533	hypothetical protein
7	spa04	9126..10259 [+], 1134	hypothetical protein
8	s054	10405..10617 [+], 213	hypothetical protein
9	traN	10628..10813 [+], 186	putative TraN pilus assembly and synthesis protein	TraN_F, T4SS component
10	spa05	10976..11503 [-], 528	hypothetical protein

Element	No. of sequences	Download
Nucleotide sequences	1	Fasta
Proteins	10	Fasta

(1) Rodriguez-Blanco A; Lemos ML; Osorio CR (2012). Integrating conjugative elements as vectors of antibiotic, mercury, and quaternary ammonium compound resistance in marine aquaculture environments. Antimicrob Agents Chemother. 56(5):2619-26. [PubMed:22314526]

experimental literature