 ICEberg ID | 460 |
Name  | ICEValPor1  |
| ICEO ID | ICEO_0000608 |
| Organism | Vibrio alginolyticus HI5 |
| Size (bp) | - |
| GC content [Genome] (%) | - |
| Insertion site | prfC |
| Function | Resistance to rifampin |
| Species that ICE can be transferred to | Escherichia coli CAG18420; Escherichia coli BI533 |
| Nucleotide Sequence | HE577623 (partial ICE sequence) |
| Putative oriT region | - |
| Putative relaxase | - |
The graph information of ICEValPor1 components from HE577623 | |||||
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| Incomplete gene list of ICEValPor1 from HE577623 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | rumB' | 6665..6934 [-], 270 | putative DNA repair protein | ||
| 2 | ORF36 | 7240..7285 [+], 46 | putative conjugation coupling factor | ||
| 3 | ORF37 | 7312..7899 [-], 588 | hypothetical protein | ||
| 4 | ORF38 | 7913..8152 [-], 240 | hypothetical protein | ||
| 5 | traA | 8170..8411 [+], 242 | putative transposase | TraA_F, T4SS component | |
| 6 | dsbC | 11962..12084 [+], 123 | putative DsbC transfer protein | ||
| 7 | traN | 12095..12286 [+], 192 | putative traN pilus assembly and synthesis protein | TraN_F, T4SS component | |
 Gene may play role in conjugative transfer |
|
(1) Rodriguez-Blanco A; Lemos ML; Osorio CR (2012). Integrating conjugative elements as vectors of antibiotic, mercury, and quaternary ammonium compound resistance in marine aquaculture environments. Antimicrob Agents Chemother. 56(5):2619-26. [PubMed:22314526]
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| experimental literature |