ICEberg
I. Information of ICE
ICEberg ID455
Name ICEVspSpa1 This ICE is derived from experimental literature
ICEO ID ICEO_0000648
OrganismVibrio splendidus ZF2
Size (bp)-
GC content [Genome] (%)-
Insertion siteprfC
FunctionMercury resistance operon
Species that ICE can be transferred toEscherichia coli CAG18420; Escherichia coli BI533
Nucleotide SequenceHE577630 (partial ICE sequence)
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICEVspSpa1 is not available.



The graph information of ICEVspSpa1 components from HE577630
Incomplete gene list of ICEVspSpa1 from HE577630
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)		 *Reannotation 
1rumB1..445 [-], 445putative DNA repair protein
2tnp729..1322 [+], 594putative transposase
3s0136356..6640 [+], 285hypothetical protein
4tnpI8979..9269 [+], 291putative transposase
5ORF369338..9384 [+], 47putative conjugation coupling factor
6ORF379411..9925 [-], 515hypothetical protein
7ORF3810012..10251 [-], 240hypothetical protein
8mosT11169..12107 [+], 939putative MosT toxin component
9spa0112687..15416 [+], 2730hypothetical protein
10spa0215413..16522 [+], 1110hypothetical protein
11spa0316535..18067 [+], 1533hypothetical protein
12spa0418382..19515 [+], 1134hypothetical protein
13s05419661..19873 [+], 213hypothetical protein
14spa0520247..20774 [-], 528hypothetical protein
15spa0620784..21557 [-], 774hypothetical protein
16merR22376..22765 [+], 390mercury resistance regulatory protein
17merT22850..23173 [+], 324mercuric ion transport protein
 

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins17Fasta
(1) Rodriguez-Blanco A; Lemos ML; Osorio CR (2012). Integrating conjugative elements as vectors of antibiotic, mercury, and quaternary ammonium compound resistance in marine aquaculture environments. Antimicrob Agents Chemother. 56(5):2619-26. [PubMed:22314526] experimental
 
experimental experimental literature

Genomics & Bioinformatics Group in MML, SJTU