 ICEberg ID | 453 |
Name  | ICEVspPor1  |
| ICEO ID | ICEO_0000646 |
| Organism | Vibrio splendidus ZD4 |
| Size (bp) | - |
| GC content [Genome] (%) | - |
| Insertion site | prfC |
| Function | - |
| Species that ICE can be transferred to | Escherichia coli CAG18420; Escherichia coli BI533 |
| Nucleotide Sequence | HE577628 (partial ICE sequence) |
| Putative oriT region | - |
| Putative relaxase | - |
The graph information of ICEVspPor1 components from HE577628 | |||||
 | |||||
| Incomplete gene list of ICEVspPor1 from HE577628 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | rumB | 1..982 [-], 982 | putative DNA repair protein | ||
| 2 | tnp | 1266..1859 [+], 594 | putative transposase | ||
| 3 | tnpA | 1973..3282 [+], 1310 | putative transposase | ||
| 4 | ORF36 | 4388..4434 [+], 47 | putative conjugation coupling factor | ||
| 5 | ORF37 | 4461..4975 [-], 515 | hypothetical protein | ||
| 6 | traN | 7616..7801 [+], 186 | putative TraN pilus assembly and synthesis protein | TraN_F, T4SS component | |
 Gene may play role in conjugative transfer |
|
(1) Rodriguez-Blanco A; Lemos ML; Osorio CR (2012). Integrating conjugative elements as vectors of antibiotic, mercury, and quaternary ammonium compound resistance in marine aquaculture environments. Antimicrob Agents Chemother. 56(5):2619-26. [PubMed:22314526]
|
| experimental literature |