 ICEberg ID | 451 |
Name  | ICEVscSpa2  |
| ICEO ID | ICEO_0000644 |
| Organism | Vibrio scophthalmi NC1 |
| Size (bp) | - |
| GC content [Genome] (%) | - |
| Insertion site | prfC |
| Function | - |
| Species that ICE can be transferred to | Escherichia coli CAG18420; Escherichia coli BI533 |
| Nucleotide Sequence | HE577624 (partial ICE sequence) |
| Putative oriT region | - |
| Putative relaxase | - |
The graph information of ICEVscSpa2 components from HE577624 | |||||
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| Incomplete gene list of ICEVscSpa2 from HE577624 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | ORF36 | 1..53 [+], 53 | putative conjugation coupling factor | ||
| 2 | ORF37 | 80..667 [-], 588 | hypothetical protein | ||
| 3 | ORF38 | 681..920 [-], 240 | hypothetical protein | ||
| 4 | traL | 920..945 [+], 26 | putative TraL sex pilus assembly and synthesis protein | ||
| 5 | traA | 956..1160 [+], 205 | putative TraA transfer protein | ||
| 6 | traN | 2358..2490 [+], 133 | putative TraN pilus assembly and synthesis protein | TraN_F, T4SS component | |
 Gene may play role in conjugative transfer |
|
(1) Rodriguez-Blanco A; Lemos ML; Osorio CR (2012). Integrating conjugative elements as vectors of antibiotic, mercury, and quaternary ammonium compound resistance in marine aquaculture environments. Antimicrob Agents Chemother. 56(5):2619-26. [PubMed:22314526]
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| experimental literature |