ICEberg ID | 448 |
Name | Tn6202 |
Organism | Enterococcus faecalis N00-410 |
Size (bp) | 43671 |
GC content [Genome] (%) | 32.49 |
Insertion site | GMP synthase |
Function | Resistance to vancomycin (VanE operon) |
Species that ICE can be transferred to | - |
Nucleotide Sequence | FJ872411 (complete ICE sequence in this GenBank file) |
Replicon | - |
Coordinates | 3539..47209 |
Putative oriT region | - |
Putative relaxase | coordinates: 11824..13125; Family: MOBT |
The graph information of Tn6202 components from FJ872411 | |||||
Complete gene list of Tn6202 from FJ872411 | |||||
# | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
1 | - | 1..546 [-], 546 | EF0120-like protein | ||
2 | - | 543..689 [-], 147 | EF0121-like protein | ||
3 | - | 713..1090 [-], 378 | EF0122-like protein | ||
4 | - | 1100..2968 [-], 1869 | EF0123-like protein | ||
5 | - | 3071..3355 [-], 285 | EF0124-like protein | ||
6 | - | 3852..6245 [+], 2394 | VE01 | ||
7 | - | 6537..9203 [+], 2667 | VE02 | ||
8 | - | 9226..9546 [+], 321 | VE03 | ||
9 | - | 9563..9967 [+], 405 | VE04 | ||
10 | - | 9974..11395 [+], 1422 | VE05 | YdcQ, T4SS component | |
11 | - | 11437..11598 [+], 162 | VE06 | ||
12 | - | 11824..13125 [+], 1302 | VE07 | Relaxase, MOBT Family | |
13 | - | 13138..13623 [+], 486 | VE08 | ||
14 | - | 13620..14003 [+], 384 | VE09 | ||
15 | - | 14000..15019 [+], 1020 | VE10 | YddB, T4SS component | |
16 | - | 15020..15343 [+], 324 | VE11 | ||
17 | - | 15346..16032 [+], 687 | VE12 | YddD, T4SS component | |
18 | - | 16046..18568 [+], 2523 | VE13 | YddE, T4SS component | |
19 | - | 18584..20362 [+], 1779 | VE14 | YddG, T4SS component | |
20 | - | 20349..21377 [+], 1029 | VE15 | YddH, T4SS component | |
21 | - | 21742..22176 [-], 435 | VE16 | ||
22 | - | 22292..22477 [-], 186 | VE17 | ||
23 | - | 22673..24403 [+], 1731 | VE18 | ||
24 | - | 24745..24846 [+], 102 | VE19 | ||
25 | - | 24871..25068 [-], 198 | VE20 | ||
26 | - | 25415..25948 [+], 534 | VE21 | ||
27 | - | 25953..26951 [+], 999 | VE22 | ||
28 | - | 27215..27454 [+], 240 | VE23 | ||
29 | - | 27982..28464 [+], 483 | VE24 | ||
30 | - | 28809..30320 [+], 1512 | VE25 | ||
31 | - | 30782..35041 [+], 4260 | VE26 | ||
32 | - | 35137..35565 [+], 429 | VE27 | ||
33 | - | 35663..36349 [+], 687 | VE28 | ||
34 | - | 36371..36682 [+], 312 | VE29 | ||
35 | - | 36708..37229 [+], 522 | VE30 | ||
36 | - | 37243..37464 [+], 222 | VE31 | ||
37 | - | 37857..38222 [+], 366 | VE32 | ||
38 | - | 38376..38837 [+], 462 | VE33 | ||
39 | - | 38895..39296 [+], 402 | VE34 | ||
40 | - | 39299..39514 [+], 216 | VE35 | ||
41 | vanE | 39736..40794 [+], 1059 | VanE | ||
42 | vanXYE | 40766..41347 [+], 582 | VanXYE | ||
43 | vanTE | 41337..43445 [+], 2109 | VanTE | ||
44 | vanRE | 43514..44203 [+], 690 | VanRE | ||
45 | vanSE | 44193..45266 [+], 1074 | VanSE | ||
46 | - | 45709..45906 [+], 198 | putative excisonase | ||
47 | int410 | 45940..47130 [+], 1191 | Int410 | Integrase | |
48 | guaA | 47198..48760 [-], 1563 | GuaA |
Flanking regions |
(1) Boyd DA; Mulvey MR (2012). The VanE operon in Enterococcus faecalis N00-410 is found on a putative integrative and conjugative element, Tn6202. J Antimicrob Chemother. . [PubMed:23034711] |