 ICEberg ID | 447 |
Name  | ICEValSpa1  |
| ICEO ID | ICEO_0000609 |
| Organism | Vibrio alginolyticus V86 |
| Size (bp) | - |
| GC content [Genome] (%) | - |
| Insertion site | prfC |
| Function | Restriction-modification (RM) systems |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | HE646882 (partial ICE sequence) |
| Putative oriT region | - |
| Putative relaxase | - |
The graph information of ICEValSpa1 components from HE646882 | |||||
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| Incomplete gene list of ICEValSpa1 from HE646882 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | tnpA | 1..946 [+], 946 | putative transposase | ||
| 2 | s021 | 414..1082 [-], 669 | s021 protein | ||
| 3 | rumB | 1289..1597 [-], 309 | rumB protein | ||
| 4 | rumA | 1566..1880 [-], 315 | rumA protein | ||
| 5 | s025 | 2081..2380 [+], 300 | s025 protein | ||
| 6 | s026 | 2698..3651 [+], 954 | s026 protein | ||
| 7 | icevalSpa1_01 | 3732..5558 [+], 1827 | ICEValSpa1_01 protein | ||
| 8 | icevalSpa1_02 | 5560..8211 [+], 2652 | ICEValSpa1_02 protein | ||
| 9 | icevalSpa1_03 | 8308..12189 [+], 3882 | hypothetical protein | ||
| 10 | icevalSpa1_04 | 12144..14615 [+], 2472 | hypothetical protein | ||
| 11 | icevalSpa1_05 | 14687..15868 [+], 1182 | hypothetical protein | ||
| 12 | - | 16190..16777 [-], 588 | hypothetical protein | ||
| 13 | - | 16791..17030 [-], 240 | hypothetical protein | ||
| 14 | s052 | 17131..17448 [+], 318 | mosA | ||
| 15 | tnpA | 17650..20628 [+], 2979 | putative transposase | ||
| 16 | s053 | 20625..21596 [+], 972 | mosT | ||
| 17 | s054 | 21725..21895 [+], 171 | s054 protein | ||
| 18 | icevalSpa1_06 | 22315..23205 [-], 891 | hypothetical protein | ||
| 19 | icevalSpa1_07 | 23247..24311 [-], 1065 | hypothetical protein | ||
| 20 | icevalSpa1_08 | 24302..24835 [-], 534 | hypothetical protein | ||
| 21 | icevalSpa1_09 | 24816..25196 [-], 381 | hypothetical protein | ||
| 22 | icevalSpa1_10 | 25204..26052 [-], 849 | hypothetical protein | ||
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(1) Balado M; Lemos ML; Osorio CR (2012). Integrating conjugative elements of the SXT/R391 family from fish-isolated Vibrios encode restriction-modification systems that confer resistance to bacteriophages. FEMS Microbiol Ecol. . [PubMed:22974320]
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| experimental literature |