ICEberg

ICE
Gene list
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References

I. Information of ICE

ICEberg ID	426
Name	Tn5801(B6)
Organism	Streptococcus mitis B6
Size (bp)	24273
GC content [Genome] (%)	35.02[39.98]
Insertion site	-
Function	Tetracycline resistance
Species that ICE can be transferred to	-
Nucleotide Sequence	FN568063 (complete ICE sequence in this genome)
Replicon	chromosome (2146611 bp, BioProject:46097) [NC_013853]
Genome coordinates	1320241..1344513
Putative oriT region	-
Putative relaxase	coordinates: 1327757..1328941; Locus tag: smi_1324; Family: MOB_T

II. ICE interaction with IME/CIME/

The interaction information of Tn5801(B6) is not available.

The graph information of Tn5801(B6) components from FN568063

Complete gene list of Tn5801(B6) from FN568063
#	Gene	Coordinates [+/-], size (bp)	Product (GenBank annotation)	*Reannotation
1	atpE	1315274..1315474 [-], 201	proton-translocating ATPase, F0 sector, subunit c
2	smi_1316	1315784..1317070 [-], 1287	peptidase
3	smi_1317	1317257..1319596 [-], 2340	hypothetical protein
4	smi_1318	1320479..1322665 [+], 2187	conserved hypothetical protein
5	smi_1319	1322662..1324455 [+], 1794	conserved hypothetical protein
6	smi_1320	1324655..1324969 [+], 315	conserved hypothetical protein
7	smi_1321	1324990..1325367 [+], 378	conserved hypothetical protein
8	smi_1322	1325377..1326150 [+], 774	conserved hypothetical protein
9	smi_1323	1326172..1327575 [+], 1404	conserved hypothetical protein	Orf21_Tn, T4SS component
10	smi_1324	1327757..1328941 [+], 1185	transcriptional regulator, Tn916	Relaxase, MOB_T Family
11	smi_1325	1329225..1329446 [+], 222	conserved hypothetical protein	Orf19_Tn, T4SS component
12	smi_1326	1329488..1330267 [+], 780	conserved hypothetical protein
13	smi_1327	1330328..1330828 [+], 501	conserved hypothetical protein
14	smi_1328	1330884..1331522 [+], 639	conserved hypothetical protein
15	smi_1329	1331594..1331989 [+], 396	conserved hypothetical protein	Orf17_Tn, T4SS component
16	smi_1330	1331973..1334426 [+], 2454	ATP/GTP-binding protein	Orf16_Tn, T4SS component
17	smi_1331	1334423..1336450 [+], 2028	transmembrane amino acid transporter protein	Orf15_Tn, T4SS component
18	smi_1332	1336447..1337469 [+], 1023	cell wall hydrolase, lytic transglycosylase	Orf14_Tn, T4SS component
19	smi_1333	1337477..1338415 [+], 939	conserved hypothetical protein	Orf13_Tn, T4SS component
20	tetM	1338792..1340711 [+], 1920	tetracycline resistance protein TetM
21	smi_1335	1340830..1340997 [+], 168	hypothetical protein, Tn916
22	smi_1336	1341055..1341408 [-], 354	transcriptional regulator, Tn916
23	smi_1337	1341640..1341750 [+], 111	conserved hypothetical protein
24	smi_1338	1341879..1342361 [+], 483	conserved hypothetical protein
25	pnpA	1342358..1342588 [+], 231	polyribonucleotide nucleotidyltransferase
26	smi_1340	1343086..1343286 [+], 201	conserved hypothetical protein
27	smi_1341	1343313..1344506 [+], 1194	site-specific recombinase, phage integrase family	Integrase
28	guaA	1344574..1346136 [-], 1563	GMP-synthase
29	smi_1343	1346278..1346976 [+], 699	transcriptional regulator
30	smi_1344	1347018..1347914 [-], 897	conserved hypothetical protein
31	smi_1345	1347923..1348858 [-], 936	conserved hypothetical protein

Flanking regions

Element	No. of sequences	Download
Nucleotide sequences	1	Fasta
Proteins	24	Fasta

(1) Denapaite D; Bruckner R; Nuhn M; Reichmann P; Henrich B; Maurer P; Schahle Y; Selbmann P; Zimmermann W; Wambutt R; Hakenbeck R (2010). The genome of Streptococcus mitis B6--what is a commensal. PLoS One. 5(2):e9426. [PubMed:20195536]