 ICEberg ID | 42 |
Name  | pMERPH  |
| ICEO ID | ICEO_0000606 |
| Organism | Shewanella putrefaciens |
| Size (bp) | - |
| GC content [Genome] (%) | - |
| Insertion site | prfC |
| Function | Resistance to mercury |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | EF434291; AY157600; AJ507319; AJ634267; AJ579923; AJ579925; AJ579924; AJ579929 (partial ICE sequence) |
| Putative oriT region | - |
| Putative relaxase | - |
The graph information of pMERPH components from AJ507319 | |||||
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| Incomplete gene list of pMERPH from AJ507319 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | merR | 69..458 [+], 390 | putative mercury resistance transcriptional regulator protein | ||
The graph information of pMERPH components from AJ579924 | |||||
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| Incomplete gene list of pMERPH from AJ579924 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | - | 1..584 [+], 584 | putative transfer protein | TraD_F, T4SS component | |
The graph information of pMERPH components from AJ579923 | |||||
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| Incomplete gene list of pMERPH from AJ579923 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | int | 1..1138 [+], 1138 | putative integrase | Integrase | |
The graph information of pMERPH components from AJ634267 | |||||
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| Incomplete gene list of pMERPH from AJ634267 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | int | 1..1242 [+], 1242 | putative integrase | Integrase | |
The graph information of pMERPH components from AJ579929 | |||||
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| Incomplete gene list of pMERPH from AJ579929 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | - | 56..265 [+], 210 | putative conjugative transfer protein | ||
The graph information of pMERPH components from AY157600 | |||||
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| Incomplete gene list of pMERPH from AY157600 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | - | 1..648 [+], 648 | putative regulatory protein | ||
The graph information of pMERPH components from EF434291 | |||||
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| Incomplete gene list of pMERPH from EF434291 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | traG | 1..144 [+], 144 | TraG | TraG_F, T4SS component | |
 Gene may play role in conjugative transfer |
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(1) Marrero J; Waldor MK (2007). The SXT/R391 family of integrative conjugative elements is composed of two exclusion groups. J Bacteriol. 189(8):3302-5. [PubMed:17307849]
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(2) McGrath BM; O'Halloran JA; Pembroke JT (2005). Pre-exposure to UV irradiation increases the transfer frequency of the IncJ conjugative transposon-like elements R391, R392, R705, R706, R997 and pMERPH and is recA+ dependent. FEMS Microbiol Lett. 243(2):461-5. [PubMed:15686850]
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(3) McGrath BM; Pembroke JT (2004). Detailed analysis of the insertion site of the mobile elements R997, pMERPH, R392, R705 and R391 in E. coli K12. FEMS Microbiol Lett. 237(1):19-26. [PubMed:15268933]
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(4) Boltner D; Osborn AM (2004). Structural comparison of the integrative and conjugative elements R391, pMERPH, R997, and SXT. Plasmid. 51(1):12-23. [PubMed:14711525]
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(5) Peters SE; Hobman JL; Strike P; Ritchie DA (1991). Novel mercury resistance determinants carried by IncJ plasmids pMERPH and R391. Mol Gen Genet. 228(1-2):294-9. [PubMed:1886614]
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| experimental literature |