ICEberg
I. Information of ICE
ICEberg ID418
Name ICEF-IIC(M64) This is a predicted ICE derived from literature
OrganismMycoplasma fermentans M64
Size (bp)22332
GC content [Genome] (%)29.03[26.86]
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceCP002458 (complete ICE sequence in this genome)
Replicon[NC_014921]
Genome coordinates833547..855878 
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICEF-IIC(M64) is not available.



The graph information of ICEF-IIC(M64) components from CP002458
Complete gene list of ICEF-IIC(M64) from CP002458
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)		 *Reannotation 
1MfeM64YM_0788829538..829957 [-], 420Hypothetical Protein
2fic-2830334..831380 [-], 1047Filamentation induced by cAMP protein Fic
3MfeM64YM_0790831795..833216 [-], 1422Transcriptional regulator
4MfeM64YM_0791833790..834509 [+], 720Hypothetical Protein
5MfeM64YM_0792834740..834931 [+], 192Hypothetical Protein
6MfeM64YM_0793834952..836154 [+], 1203Hypothetical Protein
7MfeM64YM_0794836164..836631 [+], 468Hypothetical Protein
8MfeM64YM_0795836631..838850 [+], 2220Conserved Hypothetical ProteinT4CP 
9MfeM64YM_0796838861..839049 [+], 189Hypothetical Protein
10MfeM64YM_0797839051..839998 [+], 948Conserved Hypothetical Protein
11MfeM64YM_0798840007..840246 [+], 240Hypothetical Protein
12MfeM64YM_0799840259..840975 [+], 717Conserved Hypothetical Protein
13MfeM64YM_0800840985..841536 [+], 552Hypothetical Protein
14MfeM64YM_0801841536..841790 [+], 255Hypothetical Protein
15MfeM64YM_0802841814..843382 [+], 1569Conserved Hypothetical Protein
16MfeM64YM_0803843497..843778 [+], 282Hypothetical Protein
17MfeM64YM_0804843778..844968 [+], 1191Hypothetical Protein
18trsE-6844984..847797 [+], 2814TrsE-like protein
19MfeM64YM_0806847778..848461 [+], 684Conserved Hypothetical Protein
20MfeM64YM_0807848507..852772 [+], 4266Hypothetical Protein
21MfeM64YM_0808853000..853128 [+], 129Hypothetical Protein
22MfeM64YM_0809853362..854288 [+], 927Hypothetical Protein
23MfeM64YM_0810854336..855502 [+], 1167Conserved Hypothetical ProteinIntegrase 
24MfeM64YM_0811856082..856264 [-], 183Conserved Hypothetical Protein
25fic-3856834..857961 [-], 1128Fic family protein
26MfeM64YM_0813858078..858230 [-], 153Hypothetical Protein
27MfeM64YM_0814858762..859091 [+], 330Hypothetical Protein
 
flank Flanking regions

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins20Fasta
(1) Shu HW; Liu TT; Chan HI; Liu YM; Wu KM; Shu HY; Tsai SF; Hsiao KJ; Hu WS; Ng WV (2011). Genome Sequence of the Repetitive-Sequence-Rich Mycoplasma fermentans Strain M64. J Bacteriol. 193(16):4302-3. [PubMed:21642450]
 

Genomics & Bioinformatics Group in MML, SJTU