ICEberg
I. Information of ICE
ICEberg ID413
Name ICEF-IA(M64) This is a predicted ICE derived from literature
OrganismMycoplasma fermentans M64
Size (bp)23778
GC content [Genome] (%)28.61[26.86]
Insertion sitetnpA-11(MfeM64YM_0368)
Function-
Species that ICE can be transferred to-
Nucleotide SequenceCP002458 (complete ICE sequence in this genome)
Replicon[NC_014921]
Genome coordinates405388..429165 
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICEF-IA(M64) is not available.



The graph information of ICEF-IA(M64) components from CP002458
Complete gene list of ICEF-IA(M64) from CP002458
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)		 *Reannotation 
1MfeM64YM_0365402628..402960 [-], 333Hypothetical Protein
2MfeM64YM_0366403282..403374 [-], 93Hypothetical Protein
3MfeM64YM_0367403424..403654 [-], 231Hypothetical Protein
4MfeM64YM_0369404932..405363 [-], 432Conserved Hypothetical Protein
5MfeM64YM_0370405764..406930 [-], 1167Conserved Hypothetical ProteinIntegrase 
6MfeM64YM_0371406978..407904 [-], 927Hypothetical Protein
7MfeM64YM_0372408137..408616 [-], 480Hypothetical Protein
8exiS-1408902..409090 [+], 189ExiS
9MfeM64YM_0374409068..409655 [-], 588Hypothetical Protein
10MfeM64YM_0375409988..413332 [-], 3345Hypothetical Protein
11MfeM64YM_0376413378..414064 [-], 687Conserved Hypothetical Protein
12trsE-3414045..416858 [-], 2814TrsE-like protein
13MfeM64YM_0378416874..418064 [-], 1191Hypothetical Protein
14MfeM64YM_0379418064..418345 [-], 282Hypothetical Protein
15MfeM64YM_0380418460..420028 [-], 1569Conserved Hypothetical Protein
16MfeM64YM_0381420052..420306 [-], 255Hypothetical Protein
17MfeM64YM_0382420306..420857 [-], 552Putative Single-stranded DNA-binding protein
18MfeM64YM_0383420867..421583 [-], 717Hypothetical Protein
19MfeM64YM_0384421596..421760 [-], 165Hypothetical Protein
20MfeM64YM_0385421831..422697 [-], 867Conserved Hypothetical Protein
21MfeM64YM_0386422687..422875 [-], 189PIWI protein
22MfeM64YM_0387422884..423831 [-], 948Conserved Hypothetical Protein
23MfeM64YM_0388423833..424021 [-], 189Hypothetical Protein
24MfeM64YM_0389424032..424988 [-], 957Hypothetical ProteinT4CP 
25MfeM64YM_0390425289..426251 [-], 963Conserved Hypothetical Protein
26MfeM64YM_0391426251..426718 [-], 468Hypothetical Protein
27MfeM64YM_0392426728..427930 [-], 1203Hypothetical Protein
28MfeM64YM_0393428202..428921 [-], 720Hypothetical Protein
29lepA429206..431005 [-], 1800GTP-binding protein LepA
30licA431093..431821 [+], 729Pts system, lichenan-specific IIA component
31MfeM64YM_0396431978..432589 [+], 612Conserved Hypothetical Protein
 
flank Flanking regions

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins24Fasta
(1) Shu HW; Liu TT; Chan HI; Liu YM; Wu KM; Shu HY; Tsai SF; Hsiao KJ; Hu WS; Ng WV (2011). Genome Sequence of the Repetitive-Sequence-Rich Mycoplasma fermentans Strain M64. J Bacteriol. 193(16):4302-3. [PubMed:21642450]
 

Genomics & Bioinformatics Group in MML, SJTU