The graph information of ICESdy12394-1 components from CP002215 |
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Complete gene list of ICESdy12394-1 from CP002215 |
# | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation |
1 | SDE12394_04550 | 881309..883408 [-], 2100 | ATP-dependent protease ATP-binding subunit ClpL | |
2 | rplJ | 884816..885313 [+], 498 | 50S ribosomal protein L10 | |
3 | rplL | 885378..885743 [+], 366 | 50S ribosomal protein L7/L12 | |
4 | SDE12394_04565 | 885942..886115 [+], 174 | hypothetical protein | |
5 | SDE12394_04570 | 886112..886930 [+], 819 | hypothetical protein | |
6 | SDE12394_04575 | 886932..887027 [+], 96 | hypothetical protein | |
7 | SDE12394_04580 | 887079..888434 [+], 1356 | C-5 cytosine-specific DNA methylase | |
8 | SDE12394_04585 | 888418..888846 [+], 429 | hypothetical protein | |
9 | SDE12394_04590 | 888857..889240 [+], 384 | hypothetical protein | |
10 | SDE12394_04595 | 889249..889482 [+], 234 | hypothetical protein | |
11 | SDE12394_04600 | 889581..890069 [+], 489 | protease, putative | |
12 | SDE12394_04605 | 890146..890634 [+], 489 | hypothetical protein | |
13 | SDE12394_04610 | 890634..892451 [+], 1818 | Type IV secretory pathway, VirD4 component | T4CP |
14 | SDE12394_04615 | 892469..892711 [+], 243 | hypothetical protein | |
15 | SDE12394_04620 | 892730..893584 [+], 855 | hypothetical protein | |
16 | SDE12394_04625 | 893646..893999 [+], 354 | hypothetical protein | |
17 | SDE12394_04640 | 896310..899111 [+], 2802 | hypothetical protein | PrgK, T4SS component |
18 | SDE12394_04645 | 899197..900042 [-], 846 | abortive infection protein AbiGII | |
19 | SDE12394_04650 | 900039..900629 [-], 591 | abortive infection protein AbiGI | |
20 | SDE12394_04655 | 900908..905803 [+], 4896 | agglutinin receptor | PrgB, T4SS component |
21 | SDE12394_04660 | 905804..905995 [+], 192 | calcium-binding protein, putative | |
22 | SDE12394_04665 | 905979..906530 [+], 552 | hypothetical protein | |
23 | SDE12394_04670 | 906579..913403 [+], 6825 | SNF2 family protein | |
24 | SDE12394_04675 | 913474..913773 [+], 300 | hypothetical protein | |
25 | SDE12394_04680 | 913787..914077 [+], 291 | hypothetical protein | |
26 | SDE12394_04685 | 914173..914811 [+], 639 | hypothetical protein | |
27 | SDE12394_04690 | 914850..915926 [+], 1077 | hypothetical protein | |
28 | SDE12394_04695 | 915980..916207 [+], 228 | hypothetical protein | |
29 | SDE12394_04700 | 916204..916593 [+], 390 | hypothetical protein | |
30 | SDE12394_04705 | 916643..916939 [+], 297 | hypothetical protein | |
31 | SDE12394_04710 | 916948..917256 [-], 309 | hypothetical protein | |
32 | SDE12394_04715 | 917243..917593 [-], 351 | hypothetical protein | |
33 | SDE12394_04720 | 917590..919005 [-], 1416 | ImpB/MucB/SamB family protein | |
34 | SDE12394_04725 | 919011..919145 [-], 135 | hypothetical protein | |
35 | SDE12394_04730 | 919148..919840 [-], 693 | repressor protein, putative | |
36 | SDE12394_04735 | 920024..920350 [-], 327 | hypothetical protein | |
37 | SDE12394_04740 | 920384..920842 [-], 459 | hypothetical protein | |
38 | SDE12394_04745 | 921381..922001 [+], 621 | cadmium resistance transporter, putative | |
39 | SDE12394_04750 | 922426..922872 [+], 447 | transcriptional repressor CopY, putative | |
40 | SDE12394_04755 | 922859..923335 [+], 477 | hypothetical protein | |
41 | SDE12394_04760 | 923483..923689 [+], 207 | putative copper-chaperone/transport protein | |
42 | SDE12394_04765 | 923828..925915 [+], 2088 | cation transporter E1-E2 family ATPase | |
43 | SDE12394_04770 | 926089..926685 [-], 597 | hypothetical protein | |
44 | SDE12394_04775 | 926694..927482 [+], 789 | hypothetical protein | |
45 | SDE12394_04780 | 927536..927835 [-], 300 | hypothetical protein | |
46 | SDE12394_04785 | 928038..928406 [+], 369 | cadmium efflux system accessory protein | |
47 | SDE12394_04800 | 930804..931022 [-], 219 | transposase | |
48 | SDE12394_04805 | 930986..931387 [-], 402 | hypothetical protein | |
49 | SDE12394_04810 | 931529..931636 [-], 108 | hypothetical protein | |
50 | SDE12394_04815 | 931960..932322 [+], 363 | hypothetical protein | |
51 | SDE12394_04820 | 932329..932694 [+], 366 | hypothetical protein | |
52 | SDE12394_04825 | 932681..934546 [+], 1866 | Tn5252, relaxase | Relaxase, MOBP Family |
53 | SDE12394_04830 | 934727..934951 [+], 225 | Cro/CI family transcriptional regulator | |
54 | SDE12394_04835 | 935230..935457 [+], 228 | hypothetical protein | |
55 | SDE12394_04840 | 935480..936679 [+], 1200 | phage integrase family site specific recombinase | Integrase |
56 | SDE12394_04845 | 936967..938214 [+], 1248 | putative D,D-carboxypeptidase, penicillin-binding protein | |
57 | SDE12394_04850 | 938305..939267 [-], 963 | polysaccharide deacetylase | |
58 | SDE12394_04855 | 939451..940737 [+], 1287 | homoserine dehydrogenase | |
59 | SDE12394_04860 | 940739..941599 [+], 861 | homoserine kinase | |