ICEberg
I. Information of ICE
ICEberg ID357
Name ICESauMRSA252-1 This is a putative ICE identified in this study by Blast
OrganismStaphylococcus aureus subsp. aureus MRSA252
Size (bp)13355
GC content [Genome] (%)30.02[32.81]
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceBX571856 (complete ICE sequence in this genome)
Replicon chromosome (2902619 bp, BioProject:265) [NC_002952]
Genome coordinates1351109..1364463 
Putative oriT region -
Putative relaxase coordinates: 1362073..1363098; Locus tag: SAR1297;  Family:  MOBT


II. ICE interaction with IME/CIME/

The interaction information of ICESauMRSA252-1 is not available.



The graph information of ICESauMRSA252-1 components from BX571856
Complete gene list of ICESauMRSA252-1 from BX571856
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)		 *Reannotation 
1SAR12821347137..1348375 [+], 1239conserved hypothetical protein
2glnR1348619..1348987 [+], 369glutamine synthetase repressor
3glnA1349006..1350346 [+], 1341glutamine synthetase
4SAR12851350840..1351037 [+], 198hypothetical protein
5SAR12871351329..1352349 [-], 1021putative transposase (pseudogene)
6SAR12881352458..1352814 [-], 357putative lipoprotein
7SAR12891352870..1353460 [-], 591putative exported protein
8SAR12901353467..1354453 [-], 987putative exported proteinPrgK, T4SS component 
9SAR12911354503..1356350 [-], 1848putative membrane proteinYddG, T4SS component 
10SAR12921356355..1357713 [-], 1359FtsK/SpoIIIE family proteinYdcQ, T4SS component 
11SAR12931357767..1360262 [-], 2496conserved hypothetical proteinYddE, T4SS component 
12SAR12941360297..1360680 [-], 384putative membrane proteinYddD, T4SS component 
13SAR12951360692..1360952 [-], 261putative membrane proteinYddC, T4SS component 
14SAR12961360957..1362012 [-], 1056putative membrane proteinYddB, T4SS component 
15SAR12971362073..1363098 [-], 1026conserved hypothetical proteinRelaxase, MOBT Family
16SAR12981363340..1363642 [-], 303hypothetical protein
17SAR12991363656..1363976 [-], 321conserved hypothetical protein
18SAR13001364127..1364420 [-], 294hypothetical protein
19SAR13021365097..1365309 [+], 213conserved hypothetical protein
20SAR13031365606..1365812 [+], 207hypothetical protein
21SAR13041367017..1367202 [+], 186putative DNA-binding protein
22SAR13051367414..1368361 [-], 948putative transposase
23SAR13061368788..1369204 [+], 417hypothetical protein
 
flank Flanking regions

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins13Fasta
Identified as part of this study from BX571856

Genomics & Bioinformatics Group in MML, SJTU