ICEberg
I. Information of ICE
ICEberg ID346
Name ICEHinB This is a predicted ICE derived from literature
OrganismHaemophilus influenzae 10810
Size (bp)55996
GC content [Genome] (%)38.78[38.14]
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceFQ312006 (complete ICE sequence in this genome)
Replicon[FQ312006]
Genome coordinates87548..143543 
Putative oriT region -
Putative relaxase coordinates: 140490..142406; Locus tag: HIB_01430;  Family:  MOBH


II. ICE interaction with IME/CIME/

The interaction information of ICEHinB is not available.



The graph information of ICEHinB components from FQ312006
Complete gene list of ICEHinB from FQ312006
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)		 *Reannotation 
1HIB_0075083095..83883 [+], 789predicted DNase
2HIB_0076084213..84467 [+], 255hypothetical protein
3HIB_0077084536..84859 [-], 324thioredoxin 1
4HIB_0078084979..85974 [-], 996fermentative D-lactate dehydrogenase, NAD-dependent
5HIB_0079085987..87096 [-], 1110cystathionine gamma-synthase, PLP-dependent
6HIB_0080087688..88524 [+], 837predicted atpase involved in chromosome partitioning
7dnaB288526..89881 [+], 1356replicative dna helicase (ec 3.6.1.-)
8HIB_0082089874..91574 [+], 1701conserved hypothetical protein
9HIB_0083091574..92125 [+], 552conserved hypothetical protein
10HIB_0084092275..93498 [+], 1224putative uncharacterized protein
11HIB_0085093795..94550 [+], 756putative uncharacterized protein
12HIB_0086094565..95038 [+], 474conserved hypothetical protein
13HIB_0087095284..95706 [+], 423Single-strand binding protein
14HIB_0088095733..96251 [+], 519conserved putative lipoprotein
15HIB_0089096467..97024 [-], 558putative uncharacterized protein
16topB2; OrderedLocusNames=NTHI011297115..99160 [+], 2046dna topoisomerase iii (ec 5.99.1.2). dna topoisomerase iii (ec 5.99.1.2)
17HIB_00910100045..100473 [+], 429conserved hypothetical protein
18HIB_00920100588..101229 [+], 642conserved hypothetical protein
19HIB_00930101369..101839 [+], 471putative DNA repair radC-like protein
20HIB_00940101932..102528 [+], 597conserved hypothetical protein
21HIB_00950102586..103350 [+], 765conserved hypothetical proteinTfc1, T4SS component 
22HIB_00960103449..104078 [+], 630conserved putative lipoproteinTfc2, T4SS component 
23HIB_00970104082..104822 [+], 741conserved putative exported proteinTfc3, T4SS component 
24HIB_00980104801..105559 [+], 759conserved putative exported proteinTfc4, T4SS component 
25HIB_00990105575..106081 [+], 507conserved putative exported proteinTfc5, T4SS component 
26HIB_01000106078..108327 [+], 2250conserved hypothetical proteinTfc6, T4SS component 
27HIB_01010108311..108646 [+], 336putative uncharacterized proteinTfc7, T4SS component 
28HIB_01020108646..109332 [+], 687conserved putative membrane proteinTfc8, T4SS component 
29HIB_01030109463..109813 [+], 351conserved putative exported proteinTfc9, T4SS component 
30HIB_01040109817..110062 [+], 246putative uncharacterized protein
31HIB_01050110082..110483 [+], 402conserved putative membrane proteinTfc10, T4SS component 
32HIB_01060110503..110874 [+], 372conserved putative membrane proteinTfc11, T4SS component 
33HIB_01070110886..111530 [+], 645conserved putative exported proteinTfc12, T4SS component 
34HIB_01080111530..112399 [+], 870conserved hypothetical proteinTfc13, T4SS component 
35HIB_01090112410..113810 [+], 1401conserved putative exported proteinTfc14, T4SS component 
36HIB_01100113820..114227 [+], 408conserved putative lipoproteinTfc15, T4SS component 
37HIB_01110114243..117113 [+], 2871conserved hypothetical proteinTfc16, T4SS component 
38HIB_01120117085..117528 [+], 444conserved hypothetical proteinTfc17, T4SS component 
39HIB_01130117538..117861 [+], 324conserved hypothetical membrane proteinTfc18, T4SS component 
40HIB_01140117870..119363 [+], 1494conserved putative membrane proteinTfc19, T4SS component 
41HIB_01150119419..119748 [-], 330conserved hypothetical membrane proteinTfc20, T4SS component 
42tnpA119906..123040 [-], 3135transposase
43HIB_01170123075..123632 [+], 558resolvase
44bla123680..124540 [+], 861beta-lactamase tem precursor (ec 3.5.2.6) (penicillinase)
45HIB_01190124764..124943 [+], 180hypothetical protein
46HIB_01200124988..125395 [-], 408hypothetical exported proteinTfc21, T4SS component 
47HIB_01210125411..127411 [-], 2001conserved putative exported proteinTfc22, T4SS component 
48HIB_01220127426..128367 [-], 942conserved putative exported proteinTfc23, T4SS component 
49HIB_01230128364..128807 [-], 444conserved hypothetical proteinTfc24, T4SS component 
50HIB_01240129182..129538 [+], 357conserved hypothetical membrane protein
51HIB_01250129623..129856 [+], 234conserved hypothetical protein
52HIB_01260129910..130107 [+], 198putative uncharacterized protein
53HIB_01270130111..130269 [+], 159hypothetical protein
54HIB_01280130400..131353 [+], 954conserved putative antirestriction protein
55HIB_01290131457..132218 [+], 762possible type I restriction enzyme M subunit
56HIB_01300132444..133010 [+], 567hypothetical protein
57HIB_01310133050..133424 [+], 375conserved hypothetical protein
58HIB_01320133414..134091 [+], 678conserved hypothetical protein
59HIB_01330134069..134686 [+], 618conserved hypothetical protein
60HIB_01340134950..135549 [-], 600e14 prophage; site-specific DNA recombinase
61HIB_01350135564..135755 [-], 192hypothetical protein
62HIB_01360135770..136057 [-], 288putative uncharacterized protein
63HIB_01370136224..136460 [-], 237hypothetical protein
64HIB_01380136482..136769 [-], 288putative uncharacterized protein
65HIB_01390136795..136911 [-], 117putative uncharacterized protein
66HIB_01400137195..137425 [+], 231putative uncharacterized protein
67HIB_01410137661..138374 [+], 714conserved hypothetical protein
68HIB_01420139094..140347 [+], 1254hypothetical protein
69HIB_01430140490..142406 [+], 1917conserved hypothetical proteinRelaxase, MOBH Family
70HIB_01440142593..143309 [+], 717putative site-specific recombinaseIntegrase 
71HIB_01450143943..145220 [-], 1278threonine synthase
72HIB_01460145263..146207 [-], 945homoserine kinase
 
flank Flanking regions

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins65Fasta
(1) Juhas M; Power PM; Harding RM; Ferguson DJ; Dimopoulou ID; Elamin AR; Mohd-Zain Z; Hood DW; Adegbola R; Erwin A; Smith A; Munson RS; Harrison A; Mansfield L; Bentley S; Crook DW (2007). Sequence and functional analyses of Haemophilus spp. genomic islands. Genome Biol. 8(11):R237. [PubMed:17996041] in_silico
 
in_silico in silico analysis literature

Genomics & Bioinformatics Group in MML, SJTU