I. Information of ICE

ICEberg ID	335
Name	ICERsoGMI1000-1
Organism	Ralstonia solanacearum GMI1000
Size (bp)	45922
GC content [Genome] (%)	63.07[67.04]
Insertion site	TTTTTTAT
Function	-
Species that ICE can be transferred to	-
Nucleotide Sequence	AL646052 (complete ICE sequence in this genome)
Replicon	chromosome (3716413 bp, BioProject:13) [NC_003295]
Genome coordinates	2780064..2825985
Putative oriT region	-
Putative relaxase	coordinates: 2804432..2806483; Locus tag: RSc2601;  Family:  MOBL

II. ICE interaction with IME/CIME/

The interaction information of ICERsoGMI1000-1 is not available.

The graph information of ICERsoGMI1000-1 components from AL646052
Complete gene list of ICERsoGMI1000-1 from AL646052
#	Gene	Coordinates [+/-], size (bp)	Product  (GenBank annotation)	*Reannotation
1	RSc2566	2775576..2776091 [+], 516	putative methylated-dna--protein-cysteine methyltransferase
2	RSc2567	2776088..2776840 [+], 753	conserved hypothetical protein
3	alkB	2776851..2777507 [+], 657	probable alkylated dna repair protein
4	alkA	2777509..2778147 [+], 639	probable dna-3-methyladenine glycosylase protein
5	ada	2778230..2779312 [+], 1083	probable ada regulatory of adaptative response contains: methylated-dna--protein-cysteine methyltransferase ec 2.1.1.63 o-6-methylguanine-dna transcription regulator
6	RSc2571	2779312..2779581 [+], 270	conserved hypothetical protein
7	RSc2572	2779621..2780043 [+], 423	probable lipoprotein
8	tISRso15	2780153..2781373 [+], 1221	isrso15-transposase protein
9	RSc2574	2781673..2781915 [-], 243	conserved hypothetical protein
10	trbI	2781912..2783189 [-], 1278	probable conjugal transfer trbi transmembrane protein	TrbI, T4SS component
11	trbG	2783192..2784196 [-], 1005	probable conjugal transfer lipoprotein trbg	TrbG, T4SS component
12	trbF	2784193..2784897 [-], 705	probable conjugal transfer trbf transmembrane protein	TrbF, T4SS component
13	trbL	2784928..2786301 [-], 1374	putative conjugal transfer trbl transmembrane protein	TrbL, T4SS component
14	RSc2579	2786298..2786624 [-], 327	putative lipoprotein	TrbJ, T4SS component
15	trbJ	2786637..2787374 [-], 738	probable conjugal transfer trbj signal peptide protein	TrbJ, T4SS component
16	trbE	2787371..2789821 [-], 2451	probable conjugal transfer protein trbe	TrbE, T4SS component
17	trbD	2789834..2790106 [-], 273	probable conjugal transfer trbd transmembrane protein	TrbD, T4SS component
18	trbC	2790103..2790495 [-], 393	probable conjugal transfer trbc transmembrane protein	TrbC, T4SS component
19	trbB	2790492..2791559 [-], 1068	probable conjugal transfer protein trbb	TrbB, T4SS component
20	RSc2585	2791556..2792032 [-], 477	hypothetical ribbon-helix-helix harboring protein
21	traG	2792029..2794056 [-], 2028	probable plasmid conjugation trag transmembrane protein	VirD4, T4SS component
22	RSc2587	2794292..2794555 [-], 264	putative lipoprotein
23	traR	2794552..2795496 [-], 945	probable plasmid replication regulatory trar transcription regulator protein
24	limA	2795654..2796046 [-], 393	probable limonene-1,2-epoxide hydrolase protein
25	limA2	2796232..2796618 [-], 387	putative limonene-1,2-epoxide hydrolase protein
26	RSc2591	2796769..2797659 [+], 891	probable transcriptional regulator transcription regulator protein
27	RSc2592	2797761..2798117 [+], 357	hypothetical protein of unknown function duf419
28	RSc2593	2798145..2799572 [-], 1428	putative carboxylesterase, type b; protein
29	gstJ	2799637..2800311 [-], 675	probable glutathione-s-transferase protein
30	RSc2595	2800406..2800735 [-], 330	conserved hypothetical protein with dimeric alpha-beta barrel
31	RSc2596	2800779..2801369 [-], 591	putative amidase related to nicotinamidase; protein
32	RSc2597	2801443..2802201 [-], 759	putative short-chain dehydrogenase/reductase sdr; oxidoreductase protein
33	RSc2598	2802374..2803273 [+], 900	probable transcription regulator protein
34	RSc2599	2803326..2804081 [-], 756	hypothetical protein
35	RSc2600	2804006..2804443 [+], 438	putative substrate-binding domain related to lysr regulator protein
36	RSc2601	2804432..2806483 [-], 2052	putative type iv secretory pathway vird2 (relaxase)-related protein	Relaxase, MOBL Family
37	traF	2806866..2807465 [-], 600	probable conjugal transfer traf transmembrane protein	TraF, T4SS component
38	RSc2603	2807462..2808007 [-], 546	conserved hypothetical protein
39	RSc2604	2808004..2808288 [-], 285	hypothetical ribbon-helix-helix protein
40	parA3	2808276..2808914 [-], 639	putative partition protein
41	RSc2606	2809180..2810025 [-], 846	probable replication initiation repa-like protein
42	RSc2607	2810052..2810327 [-], 276	putative dna binding protein
43	RSc2608	2810442..2811212 [-], 771	putative aspartate decarboxylase-like fold harboring protein
44	RSc2609	2811557..2812150 [-], 594	probable lipoprotein
45	RSc2610	2812223..2812513 [+], 291	putative transcription regulator protein
46	RSc2611	2812522..2813085 [+], 564	hypothetical tir protein
47	RSc2612	2813107..2813955 [+], 849	hypothetical transmembrane protein
48	RSc2613	2814305..2814619 [-], 315	hypothetical protein of unknown function duf736	TraF, T4SS component
49	RSc2614	2815483..2816184 [-], 702	conserved hypothetical protein
50	RSc2615	2816196..2816681 [-], 486	conserved hypothetical protein
51	RSc2616	2816842..2817048 [-], 207	conserved hypothetical protein
52	RSc2617	2817109..2818902 [-], 1794	conserved hypothetical protein
53	RSc2618	2818983..2819813 [-], 831	putative f plasmid gene 32-like protein
54	RSc2619	2820359..2822662 [+], 2304	conserved hypothetical protein
55	radC2	2822729..2823238 [-], 510	probable dna repair radc-like protein
56	RSc2621	2823536..2824603 [-], 1068	hypothetical protein of unknown function duf1016
57	int	2824600..2825802 [-], 1203	integrase-tyrosine recombinase protein	Integrase
58	purM	2826032..2827093 [-], 1062	probable phosphoribosylformylglycinamidine cyclo-ligase (airs)(phosphoribosyl-aminoimidazole synthetase) (air synthase) protein
59	RSc2624	2827245..2828315 [+], 1071	probable permease transmembrane transport protein
60	RSc2625	2828338..2829039 [+], 702	putative cog0593, atpase involved in dna replication initiation protein
61	RSc2626	2829146..2829820 [+], 675	probable had-superfamily subfamily ib, pspase-like; protein

Flanking regions

(1) Salanoubat M; Genin S; Artiguenave F; Gouzy J; Mangenot S; Arlat M; Billault A; Brottier P; Camus JC; Cattolico L; Chandler M; Choisne N; Claudel-Renard C; Cunnac S; Demange N; Gaspin C; Lavie M; Moisan A; Robert C; Saurin W; Schiex T; Siguier P; Thebault P; Whalen M; Wincker P; Levy M; Weissenbach J; Boucher CA (2002). Genome sequence of the plant pathogen Ralstonia solanacearum. Nature. 415(6871):497-502. [PubMed:11823852]