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I. Information of ICE

ICEberg ID	333
Name	ICE(Tn4371)6071
Organism	Thioalkalivibrio sp. HL-EbGR7
Size (bp)	42540
GC content [Genome] (%)	64.95
Insertion site	-
Function	Potassium transporter system
Species that ICE can be transferred to	-
Nucleotide Sequence	CP001339 (complete ICE sequence in this genome)
Replicon	chromosome (3464554 bp, BioProject:29177) [NC_011901]
Genome coordinates	1988584..2031125
Putative oriT region	-
Putative relaxase	coordinates: 2005518..2007629; Locus tag: Tgr7_1883;  Family:  MOBL

II. ICE interaction with IME/CIME/

The interaction information of ICE(Tn4371)6071 is not available.

The graph information of ICE(Tn4371)6071 components from CP001339
Complete gene list of ICE(Tn4371)6071 from CP001339
#	Gene	Coordinates [+/-], size (bp)	Product  (GenBank annotation)	*Reannotation
1	Tgr7_1862	1984726..1984986 [-], 261	hypothetical protein
2	Tgr7_1863	1985176..1985412 [+], 237	hypothetical protein
3	Tgr7_1864	1985626..1988274 [-], 2649	putative diguanylate cyclase
4	Tgr7_1865	1988584..1989789 [+], 1206	integrase family protein	Integrase
5	Tgr7_1866	1989786..1990949 [+], 1164	protein of unknown function DUF1016
6	Tgr7_1867	1991275..1991781 [+], 507	DNA repair protein RadC
7	Tgr7_1868	1991850..1994306 [-], 2457	conserved hypothetical protein
8	Tgr7_1869	1994701..1995525 [+], 825	protein of unknown function DUF932
9	Tgr7_1870	1995606..1997660 [+], 2055	ParB domain protein nuclease
10	Tgr7_1871	1997723..1997932 [+], 210	conserved hypothetical protein
11	Tgr7_1872	1998065..1998499 [-], 435	conserved hypothetical protein
12	Tgr7_1873	1999324..1999638 [+], 315	protein of unknown function DUF736	TraF, T4SS component
13	Tgr7_1874	1999702..2000007 [-], 306	transcriptional regulator, XRE family
14	Tgr7_1875	2000251..2000601 [+], 351	putative lipoprotein
15	Tgr7_1876	2000910..2001671 [+], 762	conserved hypothetical protein
16	Tgr7_1877	2001755..2002036 [+], 282	conserved hypothetical protein
17	Tgr7_1878	2002063..2002920 [+], 858	conserved hypothetical replication initiator and transcription repressor protein
18	Tgr7_1879	2003174..2003812 [+], 639	Cobyrinic acid ac-diamide synthase
19	Tgr7_1880	2003809..2004081 [+], 273	conserved hypothetical protein
20	Tgr7_1881	2004078..2004611 [+], 534	transposon
21	Tgr7_1882	2004608..2005207 [+], 600	TraF peptidase. Serine peptidase. MEROPS family S26C	TraF, T4SS component
22	Tgr7_1883	2005518..2007629 [+], 2112	conserved hypothetical protein	Relaxase, MOBL Family
23	Tgr7_1884	2007655..2008389 [-], 735	response regulator receiver protein
24	Tgr7_1885	2008373..2011114 [-], 2742	sensor protein KdpD
25	Tgr7_1886	2011207..2011662 [-], 456	PTS system, nitrogen regulatory IIA component
26	Tgr7_1887	2011659..2012315 [-], 657	Potassium-transporting ATPase
27	Tgr7_1888	2012326..2014365 [-], 2040	potassium-transporting ATPase subunit B
28	Tgr7_1889	2014376..2016085 [-], 1710	Potassium-transporting ATPase
29	Tgr7_1890	2016140..2016817 [-], 678	conserved hypothetical protein
30	Tgr7_1891	2017350..2018294 [+], 945	transcriptional regulator, LysR family
31	Tgr7_1892	2018291..2018569 [+], 279	putative lipoprotein
32	Tgr7_1893	2018806..2020818 [+], 2013	TRAG family protein	VirD4, T4SS component
33	Tgr7_1894	2020815..2021279 [+], 465	CopG domain protein DNA-binding domain protein
34	Tgr7_1895	2021276..2022346 [+], 1071	P-type conjugative transfer ATPase TrbB	TrbB, T4SS component
35	Tgr7_1896	2022343..2022735 [+], 393	Conjugal transfer protein TrbC	TrbC, T4SS component
36	Tgr7_1897	2022732..2023004 [+], 273	putative conjugal transfer TrbD transmembrane protein	TrbD, T4SS component
37	Tgr7_1898	2023017..2025470 [+], 2454	CagE TrbE VirB component of type IV transporter system	TrbE, T4SS component
38	Tgr7_1899	2025467..2026192 [+], 726	P-type conjugative transfer protein TrbJ	TrbJ, T4SS component
39	Tgr7_1900	2026204..2026524 [+], 321	putative lipoprotein	TrbJ, T4SS component
40	Tgr7_1901	2026521..2027903 [+], 1383	P-type conjugative transfer protein TrbL	TrbL, T4SS component
41	Tgr7_1902	2027916..2028620 [+], 705	Conjugal transfer protein	TrbF, T4SS component
42	Tgr7_1903	2028617..2029609 [+], 993	P-type conjugative transfer protein TrbG	TrbG, T4SS component
43	Tgr7_1904	2029612..2030886 [+], 1275	conjugation TrbI family protein	TrbI, T4SS component
44	Tgr7_1905	2030883..2031125 [+], 243	conserved hypothetical protein
45	Tgr7_1906	2032038..2032595 [-], 558	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
46	Tgr7_1907	2032602..2034431 [-], 1830	excinuclease ABC subunit C
47	Tgr7_1908	2034451..2035107 [-], 657	conserved hypothetical protein
48	Tgr7_1909	2035170..2035832 [-], 663	response regulator receiver protein

Flanking regions

Element	No. of sequences	Download
Nucleotide sequences	1	Fasta
Proteins	41	Fasta

(1) Ryan MP; Pembroke JT; Adley CC (2009). Novel Tn4371-ICE like element in Ralstonia pickettii and genome mining for comparative elements. BMC Microbiol. 0.543055556. [PubMed:19941653]

experimental literature

in silico analysis literature

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