ICEberg ID | 330 |
Name | Tn3872 |
ICEO ID | ICEO_0000690 |
Organism | Streptococcus pyogenes C-105 |
Size (bp) | - |
GC content [Genome] (%) | - |
Insertion site | AT rich regions |
Function | Erythromycin and tetracycline resistance |
Species that ICE can be transferred to | - |
Nucleotide Sequence | AM411624 (partial ICE sequence) |
Putative oriT region | - |
Putative relaxase | - |
The graph information of Tn3872 components from AM411624 | |||||
Incomplete gene list of Tn3872 from AM411624 | |||||
# | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
1 | - | 318..404 [+], 87 | tet(M) leader peptide | ||
2 | tet(M) | 420..2339 [+], 1920 | tetracycline resistance protein | AR | |
3 | - | 2437..2625 [+], 189 | hypothetical protein | ||
4 | - | 2685..2821 [-], 137 | - | ||
5 | - | 3234..3317 [+], 84 | rRNA methylase leader peptide | ||
6 | erm(B) | 3442..4179 [+], 738 | rRNA methylase | AR |
Gene may be involved in adaptative function |
(1) Brenciani A; Bacciaglia A; Vecchi M; Vitali LA; Varaldo PE; Giovanetti E (2007). Genetic elements carrying erm(B) in Streptococcus pyogenes and association with tet(M) tetracycline resistance gene. Antimicrob Agents Chemother. 51(4):1209-16. [PubMed:17261630] |
(2) McDougal LK; Tenover FC; Lee LN; Rasheed JK; Patterson JE; Jorgensen JH; LeBlanc DJ (1998). Detection of Tn917-like sequences within a Tn916-like conjugative transposon (Tn3872) in erythromycin-resistant isolates of Streptococcus pneumoniae. Antimicrob Agents Chemother. 42(9):2312-8. [PubMed:9736555] |
experimental literature |