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ICE
Gene list
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References
I. Information of ICE
ICEberg ID
274
Name
SXT(MCV09)
ICEO ID
ICEO_0000621
Organism
Vibrio cholerae
MCV09
Size (bp)
-
GC content [Genome] (%)
-
Insertion site
prfC
Function
Trimethoprim, sulphamethoxazole and streptomycin resistance
Species that ICE can be transferred to
-
Nucleotide Sequence
GQ495075
(partial ICE sequence)
Putative
oriT
region
-
Putative relaxase
-
II. ICE interaction with IME/CIME/
The interaction information of SXT(MCV09) is not available.
The graph information of SXT(MCV09) components from
GQ495075
Incomplete gene list of SXT(MCV09) from
GQ495075
#
Gene
Coordinates [+/-], size (bp)
Product
(GenBank annotation)
*Reannotation
1
int
1..1242 [+], 1242
integrase
Integrase
Gene may contribute to site-specific recombination
Element
No. of sequences
Download
Nucleotide sequences
1
Fasta
Proteins
1
Fasta
(1) Kumar P; Wilson PA; Bhai R; Thomas S (2010). Characterization of an SXT variant Vibrio cholerae O1 Ogawa isolated from a patient in Trivandrum, India.
FEMS Microbiol Lett
. 303(2):132-6. [
PubMed:20030727
]
experimental literature