ICEberg
I. Information of ICE
ICEberg ID242
Name HHGI1 This ICE is derived from experimental literature
ICEO ID ICEO_0000165
OrganismHelicobacter hepaticus ATCC 51449
Size (bp)71027
GC content [Genome] (%)33.15[35.93]
Insertion siteHH0233/HH0302
FunctionVirulence
Species that ICE can be transferred to-
Nucleotide SequenceAE017125 (complete ICE sequence in this genome)
Replicon chromosome (1799146 bp, BioProject:185) [NC_004917]
Genome coordinates223218..294244 
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of HHGI1 is not available.



The graph information of HHGI1 components from AE017125
Complete gene list of HHGI1 from AE017125
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)		 *Reannotation 
1HH_0229220079..220633 [-], 555conserved hypothetical protein
2HH_0230220653..220868 [-], 216conserved hypothetical protein
3HH_0231220957..221601 [-], 645hypothetical protein
4HH_0232221601..223130 [-], 1530conserved hypothetical protein
5HH_0233223218..224198 [-], 981hypothetical protein
6HH_0234224333..225118 [-], 786hypothetical protein
7HH_0235225105..226610 [-], 1506hypothetical protein
8HH_0236226607..227245 [-], 639hypothetical protein
9HH_0237227242..228036 [-], 795hypothetical protein
10HH_0238228126..228986 [-], 861DNA adenine methylase
11HH_0239228983..229768 [-], 786type II restriction endonuclease
12HH_0240229864..230250 [-], 387hypothetical protein
13HH_0241230306..231583 [-], 1278hypothetical protein
14HH_0242231618..234416 [-], 2799hypothetical proteinVF 
15HH_0243234543..235052 [-], 510conserved hypothetical proteinVF 
16HH_0244235149..236144 [-], 996conserved hypothetical protein
17HH_0245236141..237856 [-], 1716conserved hypothetical protein
18HH_0246237926..238315 [-], 390conserved hypothetical protein
19HH_0247238319..239791 [-], 1473conserved hypothetical protein
20HH_0248239839..240336 [-], 498conserved hypothetical protein
21HH_0249240524..241060 [+], 537conserved hypothetical protein
22HH_0250241053..242432 [+], 1380conserved hypothetical protein
23HH_0251242444..243232 [+], 789conserved hypothetical protein
24HH_0252243237..246791 [+], 3555conserved hypothetical protein
25HH_0253246801..247781 [+], 981hypothetical protein
26HH_0254247872..249140 [-], 1269hypothetical protein
27HH_0255249168..253067 [-], 3900hypothetical protein
28HH_0256253173..254729 [-], 1557hypothetical protein
29HH_0257254722..256059 [-], 1338hypothetical protein
30HH_0258256069..256437 [-], 369hypothetical protein
31HH_0259256448..257131 [-], 684hypothetical protein
32HH_0260257124..258914 [-], 1791conserved hypothetical protein
33HH_0261258911..259519 [-], 609hypothetical protein
34HH_0262260339..260572 [-], 234hypothetical protein
35HH_0263260650..260802 [-], 153hypothetical protein
36HH_0264260976..261083 [-], 108hypothetical protein
37HH_0265261105..261455 [+], 351hypothetical protein
38HH_0266261497..262198 [+], 702hypothetical protein
39HH_0267262248..262463 [+], 216hypothetical protein
40HH_0268262472..262783 [+], 312conserved hypothetical protein
41HH_0269263405..264250 [-], 846integraseIntegrase 
42HH_0270264681..266786 [-], 2106hypothetical protein
43HH_0271266913..267017 [+], 105hypothetical protein
44HH_0272267829..268335 [-], 507hypothetical protein
45HH_0273268350..268697 [-], 348hypothetical protein
46HH_0274268841..269578 [-], 738hypothetical protein
47HH_0275270051..273479 [+], 3429conserved hypothetical protein
48HH_0276273583..274074 [-], 492hypothetical protein
49HH_0277274388..274930 [+], 543hypothetical protein
50HH_0278274985..275353 [+], 369conserved hypothetical protein
51HH_0279275943..276164 [+], 222hypothetical protein
52HH_0280276333..277097 [+], 765hypothetical protein
53HH_0281277272..277757 [-], 486hypothetical protein
54HH_0282277768..278403 [-], 636hypothetical protein
55HH_0283278548..278862 [-], 315hypothetical protein
56HH_0284279091..279288 [-], 198hypothetical protein
57HH_0285279285..279725 [-], 441hypothetical protein
58HH_0286279845..279973 [-], 129hypothetical protein
59HH_0287280153..280551 [-], 399hypothetical protein
60HH_0288280624..280926 [-], 303hypothetical protein
61HH_0289280975..282777 [-], 1803hypothetical protein
62HH_0290282791..283441 [-], 651hypothetical protein
63HH_0291283450..284859 [-], 1410hypothetical protein
64HH_0292284856..285515 [-], 660hypothetical protein
65HH_0293285602..286213 [-], 612hypothetical protein
66HH_0294286290..288848 [-], 2559hypothetical protein
67HH_0295288848..289528 [-], 681hypothetical protein
68HH_0296289525..290304 [-], 780hypothetical protein
69HH_0297290304..290471 [-], 168hypothetical protein
70HH_0298290468..291052 [-], 585hypothetical protein
71HH_0299291049..291627 [-], 579hypothetical protein
72HH_0300291632..292222 [-], 591hypothetical protein
73HH_0301292581..293294 [-], 714hypothetical protein
74HH_0302293312..294244 [-], 933hypothetical protein
75trpG294424..295005 [-], 582para-aminobenzoate synthase glutamine amidotransferase component II
76trpE_1295002..296852 [-], 1851para-aminobenzoate synthase glutamine amidotransferase component I
77HH_0305296981..299242 [+], 2262hypothetical protein
 
flank Flanking regions

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins70Fasta
-

Genomics & Bioinformatics Group in MML, SJTU